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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183562342
OOBW01000047
481233
Actinomycetota
CCC
Gly
>WENV183562297
OOBW01000027
178658
Actinomycetota
CAA
Leu
>WENV183562299
OOBW01000028
175907
Actinomycetota
TAC
Val
>WENV183562276
OOBW01000022
316729
Actinomycetota
CAC
Val
>WENV183562312
OOBW01000039
295964
Actinomycetota
GTT
Asn
>WENV183562313
OOBW01000039
295964
Actinomycetota
GTT
Asn
>WENV183562234
OOBW01000006
56083
Actinomycetota
CGA
Ser
>WENV183562286
OOBW01000026
140768
Actinomycetota
TAG
Leu
>WENV183562222
OOBW01000004
176075
Actinomycetota
TCT
Arg
>WENV183562279
OOBW01000022
176078
Actinomycetota
GGG
Pro
>WENV183562555
OOBW01000235
176078
Actinomycetota
GGG
Pro
>WENV183562282
OOBW01000025
482604
Actinomycetota
TTG
Gln
>WENV183562338
OOBW01000047
59689
Actinomycetota
GGA
Ser
>WENV183562591
OOBW01000307
59689
Actinomycetota
GGA
Ser
>WENV183562283
OOBW01000025
175837
Actinomycetota
ACG
Arg
>WENV183562284
OOBW01000025
175837
Actinomycetota
ACG
Arg
>WENV183562294
OOBW01000027
175837
Actinomycetota
ACG
Arg
>WENV183562295
OOBW01000027
175837
Actinomycetota
ACG
Arg
>WENV183562327
OOBW01000042
46681
Actinomycetota
CGA
Ser
>WENV183562233
OOBW01000006
29393
Actinomycetota
GCT
Ser
>WENV183562293
OOBW01000026
280549
Actinomycetota
CAC
Val
>WENV183562391
OOBW01000082
349164
Actinomycetota
CTC
Glu
>WENV183562510
OOBW01000176
487769
Actinomycetota
TCC
Gly
>WENV183562218
OOBW01000004
280702
Actinomycetota
GGC
Ala
>WENV183562219
OOBW01000004
280702
Actinomycetota
GGC
Ala
>WENV183562275
OOBW01000022
434162
Actinomycetota
GAC
Val
>WENV183562292
OOBW01000026
434162
Actinomycetota
GAC
Val
>WENV183562238
OOBW01000006
176077
Actinomycetota
CAT
Met
>WENV183562281
OOBW01000025
21508
Actinomycetota
GAG
Leu
>WENV183562331
OOBW01000045
280524
Actinomycetota
TGC
Ala
>WENV183562229
OOBW01000006
398948
Actinomycetota
TTC
Glu
>WENV183562322
OOBW01000042
398948
Actinomycetota
TTC
Glu
>WENV183562223
OOBW01000004
150272
Actinomycetota
TAA
Leu
>WENV183562231
OOBW01000006
117777
Actinomycetota
>WENV183562511
OOBW01000176
117777
Actinomycetota
>WENV183562315
OOBW01000039
280523
Actinomycetota
GGC
Ala
>WENV183562316
OOBW01000039
280523
Actinomycetota
GGC
Ala
>WENV183562232
OOBW01000006
175949
Actinomycetota
CAT
Met
>WENV183562512
OOBW01000176
175949
Actinomycetota
CAT
Met
>WENV183562329
OOBW01000045
191955
Actinomycetota
TGT
Thr
>WENV183562221
OOBW01000004
280544
Actinomycetota
GTG
His
>WENV183562324
OOBW01000042
179229
Actinomycetota
GTC
Asp
>WENV183562325
OOBW01000042
179229
Actinomycetota
GTC
Asp
>WENV183562287
OOBW01000026
280496
Actinomycetota
CGT
Thr
>WENV183562239
OOBW01000006
280703
Actinomycetota
CCT
Arg
>WENV183562220
OOBW01000004
184157
Actinomycetota
TGG
Pro
>WENV183562323
OOBW01000042
178569
Actinomycetota
CAT
Met
>WENV183562339
OOBW01000047
280450
Actinomycetota
TTT
Lys
>WENV183562285
OOBW01000026
323758
Actinomycetota
CGT
Thr
>WENV183562290
OOBW01000026
358727
Actinomycetota
CCG
Arg
>WENV183562340
OOBW01000047
99865
Actinomycetota
CAG
Leu
>WENV183562463
OOBW01000122
99865
Actinomycetota
CAG
Leu
>WENV183562289
OOBW01000026
222475
Actinomycetota
CTT
Lys
>WENV183562314
OOBW01000039
480319
Actinomycetota
TTG
Gln
>WENV183562224
OOBW01000004
175843
Actinomycetota
CAA
Leu
>WENV183562607
OOBW01000341
237585
Actinomycetota
TAC
Val
>WENV183562235
OOBW01000006
56075
Actinomycetota
TGA
Ser
>WENV183562392
OOBW01000082
430848
Actinomycetota
CTG
Gln
>WENV183562558
OOBW01000239
430848
Actinomycetota
CTG
Gln
>WENV183562330
OOBW01000045
179238
Actinomycetota
GAT
Ile
>WENV183562397
OOBW01000085
280470
Actinomycetota
CGT
Thr
>WENV183562462
OOBW01000122
480376
Actinomycetota
CCC
Gly
>WENV183562398
OOBW01000085
140921
Actinomycetota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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