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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183563171
OOBX01000019
179231
Actinomycetota
TAC
Val
>WENV183563094
OOBX01000004
176499
Actinomycetota
CAT
Met
>WENV183563298
OOBX01000075
175883
Actinomycetota
GAT
Ile
>WENV183563219
OOBX01000035
175907
Actinomycetota
TAC
Val
>WENV183563109
OOBX01000006
280498
Actinomycetota
GTT
Asn
>WENV183563110
OOBX01000006
280498
Actinomycetota
GTT
Asn
>WENV183563113
OOBX01000006
280498
Actinomycetota
GTT
Asn
>WENV183563425
OOBX01000177
280498
Actinomycetota
GTT
Asn
>WENV183563426
OOBX01000177
280498
Actinomycetota
GTT
Asn
>WENV183563325
OOBX01000102
280503
Actinomycetota
CCT
Arg
>WENV183563427
OOBX01000177
295964
Actinomycetota
GTT
Asn
>WENV183563338
OOBX01000109
56083
Actinomycetota
CGA
Ser
>WENV183563090
OOBX01000004
140768
Actinomycetota
TAG
Leu
>WENV183563224
OOBX01000038
140768
Actinomycetota
TAG
Leu
>WENV183563166
OOBX01000016
176075
Actinomycetota
TCT
Arg
>WENV183563570
OOBX01000608
175848
Actinomycetota
TGG
Pro
>WENV183563467
OOBX01000226
176078
Actinomycetota
GGG
Pro
>WENV183563539
OOBX01000434
482604
Actinomycetota
TTG
Gln
>WENV183563548
OOBX01000473
59689
Actinomycetota
GGA
Ser
>WENV183563254
OOBX01000055
175837
Actinomycetota
ACG
Arg
>WENV183563255
OOBX01000055
175837
Actinomycetota
ACG
Arg
>WENV183563382
OOBX01000136
175837
Actinomycetota
ACG
Arg
>WENV183563383
OOBX01000136
175837
Actinomycetota
ACG
Arg
>WENV183563304
OOBX01000078
186055
Actinomycetota
ACG
Arg
>WENV183563305
OOBX01000078
186055
Actinomycetota
ACG
Arg
>WENV183563337
OOBX01000109
29393
Actinomycetota
GCT
Ser
>WENV183563232
OOBX01000038
280549
Actinomycetota
CAC
Val
>WENV183563417
OOBX01000175
280441
Actinomycetota
CCG
Arg
>WENV183563540
OOBX01000434
280702
Actinomycetota
GGC
Ala
>WENV183563541
OOBX01000434
280702
Actinomycetota
GGC
Ala
>WENV183563197
OOBX01000032
176077
Actinomycetota
CAT
Met
>WENV183563721
OOBX01007216
117881
Actinomycetota
TAG
Leu
>WENV183563432
OOBX01000184
21508
Actinomycetota
GAG
Leu
>WENV183563118
OOBX01000006
176638
Actinomycetota
GGG
Pro
>WENV183563346
OOBX01000115
280524
Actinomycetota
TGC
Ala
>WENV183563409
OOBX01000149
280524
Actinomycetota
TGC
Ala
>WENV183563064
OOBX01000002
481719
Actinomycetota
GCA
Cys
>WENV183563192
OOBX01000032
398948
Actinomycetota
TTC
Glu
>WENV183563063
OOBX01000002
291585
Actinomycetota
GCC
Gly
>WENV183563065
OOBX01000002
291585
Actinomycetota
GCC
Gly
>WENV183563066
OOBX01000002
291585
Actinomycetota
GCC
Gly
>WENV183563167
OOBX01000016
150272
Actinomycetota
TAA
Leu
>WENV183563335
OOBX01000109
117777
Actinomycetota
>WENV183563112
OOBX01000006
280523
Actinomycetota
GGC
Ala
>WENV183563347
OOBX01000115
280523
Actinomycetota
GGC
Ala
>WENV183563336
OOBX01000109
175949
Actinomycetota
CAT
Met
>WENV183563231
OOBX01000038
418252
Actinomycetota
GAC
Val
>WENV183563424
OOBX01000177
418252
Actinomycetota
GAC
Val
>WENV183563522
OOBX01000361
191955
Actinomycetota
TGT
Thr
>WENV183563098
OOBX01000004
175841
Actinomycetota
TAT
Ile
>WENV183563168
OOBX01000016
280544
Actinomycetota
GTG
His
>WENV183563225
OOBX01000038
280496
Actinomycetota
CGT
Thr
>WENV183563082
OOBX01000004
175872
Actinomycetota
GTC
Asp
>WENV183563097
OOBX01000004
175872
Actinomycetota
GTC
Asp
>WENV183563198
OOBX01000032
280703
Actinomycetota
CCT
Arg
>WENV183563085
OOBX01000004
20205
Actinomycetota
GCT
Ser
>WENV183563488
OOBX01000266
175926
Actinomycetota
CAT
Met
>WENV183563086
OOBX01000004
280450
Actinomycetota
TTT
Lys
>WENV183563227
OOBX01000038
280450
Actinomycetota
TTT
Lys
>WENV183563418
OOBX01000175
200581
Actinomycetota
CAT
Met
>WENV183563223
OOBX01000038
323758
Actinomycetota
CGT
Thr
>WENV183563348
OOBX01000115
480329
Actinomycetota
CCC
Gly
>WENV183563144
OOBX01000009
483206
Actinomycetota
CTG
Gln
>WENV183563108
OOBX01000006
175882
Actinomycetota
TGG
Pro
>WENV183563119
OOBX01000006
20209
Actinomycetota
GAG
Leu
>WENV183563567
OOBX01000592
99865
Actinomycetota
CAG
Leu
>WENV183563111
OOBX01000006
480319
Actinomycetota
TTG
Gln
>WENV183563087
OOBX01000004
280489
Actinomycetota
CTC
Glu
>WENV183563351
OOBX01000122
280499
Actinomycetota
CCT
Arg
>WENV183563088
OOBX01000004
398853
Actinomycetota
CTG
Gln
>WENV183563399
OOBX01000143
398853
Actinomycetota
CTG
Gln
>WENV183563107
OOBX01000006
175843
Actinomycetota
CAA
Leu
>WENV183563462
OOBX01000217
175843
Actinomycetota
CAA
Leu
>WENV183563520
OOBX01000343
203883
Actinomycetota
TCT
Arg
>WENV183563194
OOBX01000032
56075
Actinomycetota
TGA
Ser
>WENV183563084
OOBX01000004
46642
Actinomycetota
CGA
Ser
>WENV183563344
OOBX01000115
104211
Actinomycetota
CAG
Leu
>WENV183563229
OOBX01000038
317680
Actinomycetota
CCG
Arg
>WENV183563093
OOBX01000004
117903
Actinomycetota
GTA
Tyr
>WENV183563095
OOBX01000004
56071
Actinomycetota
TGA
Ser
>WENV183563408
OOBX01000149
179238
Actinomycetota
GAT
Ile
>WENV183563106
OOBX01000006
147796
Actinomycetota
TAA
Leu
>WENV183563089
OOBX01000004
280470
Actinomycetota
CGT
Thr
>WENV183563566
OOBX01000592
480376
Actinomycetota
CCC
Gly
>WENV183563228
OOBX01000038
200276
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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