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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183566071
OOCA01000013
176499
Actinomycetota
CAT
Met
>WENV183566437
OOCA01001314
175907
Actinomycetota
TAC
Val
>WENV183566546
OOCA01004771
147829
Actinomycetota
TAA
Leu
>WENV183566164
OOCA01000102
147806
Actinomycetota
TAA
Leu
>WENV183566079
OOCA01000020
280498
Actinomycetota
GTT
Asn
>WENV183566080
OOCA01000020
280498
Actinomycetota
GTT
Asn
>WENV183566432
OOCA01001228
280498
Actinomycetota
GTT
Asn
>WENV183566309
OOCA01000496
459899
Actinomycetota
TTC
Glu
>WENV183566067
OOCA01000013
140768
Actinomycetota
TAG
Leu
>WENV183566620
OOCA01010308
176075
Actinomycetota
TCT
Arg
>WENV183566110
OOCA01000045
175837
Actinomycetota
ACG
Arg
>WENV183566111
OOCA01000045
175837
Actinomycetota
ACG
Arg
>WENV183566600
OOCA01008013
175837
Actinomycetota
ACG
Arg
>WENV183566604
OOCA01008462
29393
Actinomycetota
GCT
Ser
>WENV183566529
OOCA01003948
280549
Actinomycetota
CAC
Val
>WENV183566580
OOCA01006423
280549
Actinomycetota
CAC
Val
>WENV183566411
OOCA01001073
398947
Actinomycetota
CCA
Trp
>WENV183566519
OOCA01003595
20450
Actinomycetota
GAG
Leu
>WENV183566672
OOCA01020981
280702
Actinomycetota
GGC
Ala
>WENV183566439
OOCA01001328
176077
Actinomycetota
CAT
Met
>WENV183566346
OOCA01000719
176638
Actinomycetota
GGG
Pro
>WENV183566116
OOCA01000048
280524
Actinomycetota
TGC
Ala
>WENV183566594
OOCA01007283
280524
Actinomycetota
TGC
Ala
>WENV183566487
OOCA01002471
398948
Actinomycetota
TTC
Glu
>WENV183566081
OOCA01000020
280523
Actinomycetota
GGC
Ala
>WENV183566117
OOCA01000048
280523
Actinomycetota
GGC
Ala
>WENV183566592
OOCA01007168
227544
Actinomycetota
TAC
Val
>WENV183566193
OOCA01000162
176555
Actinomycetota
CAT
Met
>WENV183566435
OOCA01001275
280496
Actinomycetota
CGT
Thr
>WENV183566606
OOCA01008518
280703
Actinomycetota
CCT
Arg
>WENV183566498
OOCA01002770
184157
Actinomycetota
TGG
Pro
>WENV183566096
OOCA01000028
280450
Actinomycetota
TTT
Lys
>WENV183566528
OOCA01003948
468141
Actinomycetota
GAC
Val
>WENV183566646
OOCA01017667
323758
Actinomycetota
CGT
Thr
>WENV183566365
OOCA01000850
56166
Actinomycetota
TGA
Ser
>WENV183566149
OOCA01000082
358727
Actinomycetota
CCG
Arg
>WENV183566119
OOCA01000048
480329
Actinomycetota
CCC
Gly
>WENV183566571
OOCA01006004
56451
Actinomycetota
CGA
Ser
>WENV183566244
OOCA01000255
175882
Actinomycetota
TGG
Pro
>WENV183566064
OOCA01000013
280489
Actinomycetota
CTC
Glu
>WENV183566197
OOCA01000170
280499
Actinomycetota
CCT
Arg
>WENV183566065
OOCA01000013
398853
Actinomycetota
CTG
Gln
>WENV183566243
OOCA01000255
176642
Actinomycetota
CAA
Leu
>WENV183566545
OOCA01004656
175843
Actinomycetota
CAA
Leu
>WENV183566084
OOCA01000022
237585
Actinomycetota
TAC
Val
>WENV183566253
OOCA01000299
203883
Actinomycetota
TCT
Arg
>WENV183566304
OOCA01000454
46642
Actinomycetota
CGA
Ser
>WENV183566114
OOCA01000048
104211
Actinomycetota
CAG
Leu
>WENV183566070
OOCA01000013
117903
Actinomycetota
GTA
Tyr
>WENV183566593
OOCA01007283
179238
Actinomycetota
GAT
Ile
>WENV183566678
OOCA01022026
60767
Actinomycetota
TGA
Ser
>WENV183566549
OOCA01005070
506175
Actinomycetota
TTG
Gln
>WENV183566066
OOCA01000013
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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