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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183590153
OOCX01000043
176499
Actinomycetota
CAT
Met
>WENV183590796
OOCX01003284
175883
Actinomycetota
GAT
Ile
>WENV183590798
OOCX01003284
175883
Actinomycetota
GAT
Ile
>WENV183590343
OOCX01000244
175907
Actinomycetota
TAC
Val
>WENV183590301
OOCX01000181
283311
Actinomycetota
CCT
Arg
>WENV183590430
OOCX01000437
349003
Actinomycetota
CCG
Arg
>WENV183590528
OOCX01000769
349003
Actinomycetota
CCG
Arg
>WENV183590197
OOCX01000088
147806
Actinomycetota
TAA
Leu
>WENV183590226
OOCX01000105
280498
Actinomycetota
GTT
Asn
>WENV183590228
OOCX01000105
280498
Actinomycetota
GTT
Asn
>WENV183590645
OOCX01001422
280498
Actinomycetota
GTT
Asn
>WENV183590608
OOCX01001204
316729
Actinomycetota
CAC
Val
>WENV183590735
OOCX01002331
280503
Actinomycetota
CCT
Arg
>WENV183590433
OOCX01000447
295964
Actinomycetota
GTT
Asn
>WENV183590661
OOCX01001577
56083
Actinomycetota
CGA
Ser
>WENV183590149
OOCX01000043
140768
Actinomycetota
TAG
Leu
>WENV183590270
OOCX01000137
56384
Actinomycetota
TGA
Ser
>WENV183590351
OOCX01000265
176075
Actinomycetota
TCT
Arg
>WENV183590360
OOCX01000287
176075
Actinomycetota
TCT
Arg
>WENV183590319
OOCX01000202
176078
Actinomycetota
GGG
Pro
>WENV183590273
OOCX01000141
20208
Actinomycetota
GAG
Leu
>WENV183590252
OOCX01000126
482604
Actinomycetota
TTG
Gln
>WENV183590458
OOCX01000533
59689
Actinomycetota
GGA
Ser
>WENV183590455
OOCX01000516
175837
Actinomycetota
ACG
Arg
>WENV183590545
OOCX01000842
175837
Actinomycetota
ACG
Arg
>WENV183590391
OOCX01000325
29393
Actinomycetota
GCT
Ser
>WENV183590296
OOCX01000173
280549
Actinomycetota
CAC
Val
>WENV183590695
OOCX01001953
24925
Actinomycetota
GCT
Ser
>WENV183590439
OOCX01000467
349164
Actinomycetota
CTC
Glu
>WENV183590651
OOCX01001515
56383
Actinomycetota
CGA
Ser
>WENV183590572
OOCX01000968
280702
Actinomycetota
GGC
Ala
>WENV183590447
OOCX01000495
140878
Actinomycetota
TAA
Leu
>WENV183590955
OOCX01007033
398843
Actinomycetota
GTT
Asn
>WENV183590189
OOCX01000081
176077
Actinomycetota
CAT
Met
>WENV183590440
OOCX01000467
418858
Actinomycetota
CTG
Gln
>WENV183590781
OOCX01003040
283312
Actinomycetota
GTG
His
>WENV183590790
OOCX01003150
241064
Actinomycetota
CTC
Glu
>WENV183590869
OOCX01004441
241064
Actinomycetota
CTC
Glu
>WENV183590107
OOCX01000022
176638
Actinomycetota
GGG
Pro
>WENV183590177
OOCX01000070
280524
Actinomycetota
TGC
Ala
>WENV183590461
OOCX01000539
283313
Actinomycetota
CCG
Arg
>WENV183590423
OOCX01000428
398948
Actinomycetota
TTC
Glu
>WENV183590453
OOCX01000510
398948
Actinomycetota
TTC
Glu
>WENV183590438
OOCX01000456
176723
Actinomycetota
TCT
Arg
>WENV183590877
OOCX01004647
291585
Actinomycetota
GCC
Gly
>WENV183590314
OOCX01000199
150272
Actinomycetota
TAA
Leu
>WENV183590389
OOCX01000325
117777
Actinomycetota
>WENV183590227
OOCX01000105
280523
Actinomycetota
GGC
Ala
>WENV183590253
OOCX01000126
280523
Actinomycetota
GGC
Ala
>WENV183590609
OOCX01001204
280523
Actinomycetota
GGC
Ala
>WENV183590390
OOCX01000325
175949
Actinomycetota
CAT
Met
>WENV183590379
OOCX01000302
227544
Actinomycetota
TAC
Val
>WENV183590180
OOCX01000074
176555
Actinomycetota
CAT
Met
>WENV183590284
OOCX01000154
191955
Actinomycetota
TGT
Thr
>WENV183590443
OOCX01000477
20415
Actinomycetota
GAG
Leu
>WENV183590754
OOCX01002701
280544
Actinomycetota
GTG
His
>WENV183590297
OOCX01000173
280496
Actinomycetota
CGT
Thr
>WENV183590190
OOCX01000081
280703
Actinomycetota
CCT
Arg
>WENV183590067
OOCX01000003
140879
Actinomycetota
TAG
Leu
>WENV183590573
OOCX01000968
184157
Actinomycetota
TGG
Pro
>WENV183590929
OOCX01006145
175926
Actinomycetota
CAT
Met
>WENV183590211
OOCX01000096
178569
Actinomycetota
CAT
Met
>WENV183590068
OOCX01000003
280450
Actinomycetota
TTT
Lys
>WENV183590148
OOCX01000043
323758
Actinomycetota
CGT
Thr
>WENV183590347
OOCX01000248
56166
Actinomycetota
TGA
Ser
>WENV183590283
OOCX01000149
480329
Actinomycetota
CCC
Gly
>WENV183590355
OOCX01000280
480329
Actinomycetota
CCC
Gly
>WENV183590868
OOCX01004441
483206
Actinomycetota
CTG
Gln
>WENV183590255
OOCX01000127
175882
Actinomycetota
TGG
Pro
>WENV183590238
OOCX01000113
99865
Actinomycetota
CAG
Leu
>WENV183590354
OOCX01000280
99865
Actinomycetota
CAG
Leu
>WENV183590167
OOCX01000057
222475
Actinomycetota
CTT
Lys
>WENV183590504
OOCX01000694
222475
Actinomycetota
CTT
Lys
>WENV183590108
OOCX01000022
480319
Actinomycetota
TTG
Gln
>WENV183590076
OOCX01000006
280499
Actinomycetota
CCT
Arg
>WENV183590065
OOCX01000003
398853
Actinomycetota
CTG
Gln
>WENV183590254
OOCX01000127
176642
Actinomycetota
CAA
Leu
>WENV183590315
OOCX01000199
175843
Actinomycetota
CAA
Leu
>WENV183590574
OOCX01000968
175843
Actinomycetota
CAA
Leu
>WENV183590075
OOCX01000006
237585
Actinomycetota
TAC
Val
>WENV183590436
OOCX01000452
56075
Actinomycetota
TGA
Ser
>WENV183590485
OOCX01000644
46642
Actinomycetota
CGA
Ser
>WENV183590282
OOCX01000149
104211
Actinomycetota
CAG
Leu
>WENV183590152
OOCX01000043
117903
Actinomycetota
GTA
Tyr
>WENV183590066
OOCX01000003
280470
Actinomycetota
CGT
Thr
>WENV183590239
OOCX01000113
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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