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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183591270
OOCY01000007
176078
Actinomycetota
GGG
Pro
>WENV183591271
OOCY01000007
20208
Actinomycetota
GAG
Leu
>WENV183591276
OOCY01000009
280524
Actinomycetota
TGC
Ala
>WENV183591272
OOCY01000009
191955
Actinomycetota
TGT
Thr
>WENV183591274
OOCY01000009
99865
Actinomycetota
CAG
Leu
>WENV183591275
OOCY01000009
179238
Actinomycetota
GAT
Ile
>WENV183591273
OOCY01000009
480376
Actinomycetota
CCC
Gly
>WENV183591278
OOCY01000013
175907
Actinomycetota
TAC
Val
>WENV183591304
OOCY01000027
59689
Actinomycetota
GGA
Ser
>WENV183591301
OOCY01000027
349164
Actinomycetota
CTC
Glu
>WENV183591302
OOCY01000027
398853
Actinomycetota
CTG
Gln
>WENV183591314
OOCY01000035
140768
Actinomycetota
TAG
Leu
>WENV183591320
OOCY01000035
280549
Actinomycetota
CAC
Val
>WENV183591315
OOCY01000035
280496
Actinomycetota
CGT
Thr
>WENV183591319
OOCY01000035
468141
Actinomycetota
GAC
Val
>WENV183591313
OOCY01000035
323758
Actinomycetota
CGT
Thr
>WENV183591317
OOCY01000035
358727
Actinomycetota
CCG
Arg
>WENV183591327
OOCY01000037
176077
Actinomycetota
CAT
Met
>WENV183591322
OOCY01000037
398948
Actinomycetota
TTC
Glu
>WENV183591328
OOCY01000037
280703
Actinomycetota
CCT
Arg
>WENV183591324
OOCY01000037
56075
Actinomycetota
TGA
Ser
>WENV183591342
OOCY01000045
176075
Actinomycetota
TCT
Arg
>WENV183591345
OOCY01000047
237585
Actinomycetota
TAC
Val
>WENV183591365
OOCY01000060
398853
Actinomycetota
CTG
Gln
>WENV183591366
OOCY01000060
280470
Actinomycetota
CGT
Thr
>WENV183591367
OOCY01000061
280450
Actinomycetota
TTT
Lys
>WENV183591458
OOCY01000163
459899
Actinomycetota
TTC
Glu
>WENV183591460
OOCY01000163
176555
Actinomycetota
CAT
Met
>WENV183591507
OOCY01000193
29393
Actinomycetota
GCT
Ser
>WENV183591505
OOCY01000193
117777
Actinomycetota
>WENV183591506
OOCY01000193
175949
Actinomycetota
CAT
Met
>WENV183591515
OOCY01000204
280524
Actinomycetota
TGC
Ala
>WENV183591516
OOCY01000204
280523
Actinomycetota
GGC
Ala
>WENV183591521
OOCY01000208
280702
Actinomycetota
GGC
Ala
>WENV183591522
OOCY01000208
280702
Actinomycetota
GGC
Ala
>WENV183591523
OOCY01000208
184157
Actinomycetota
TGG
Pro
>WENV183591520
OOCY01000208
506175
Actinomycetota
TTG
Gln
>WENV183591526
OOCY01000214
358727
Actinomycetota
CCG
Arg
>WENV183591536
OOCY01000219
176499
Actinomycetota
CAT
Met
>WENV183591535
OOCY01000219
117903
Actinomycetota
GTA
Tyr
>WENV183591579
OOCY01000280
480329
Actinomycetota
CCC
Gly
>WENV183591578
OOCY01000280
104211
Actinomycetota
CAG
Leu
>WENV183591617
OOCY01000340
280498
Actinomycetota
GTT
Asn
>WENV183591618
OOCY01000340
280523
Actinomycetota
GGC
Ala
>WENV183591632
OOCY01000368
175837
Actinomycetota
ACG
Arg
>WENV183591633
OOCY01000368
175837
Actinomycetota
ACG
Arg
>WENV183591655
OOCY01000424
280499
Actinomycetota
CCT
Arg
>WENV183591684
OOCY01000498
150272
Actinomycetota
TAA
Leu
>WENV183591742
OOCY01000686
46642
Actinomycetota
CGA
Ser
>WENV183591779
OOCY01000824
175882
Actinomycetota
TGG
Pro
>WENV183591788
OOCY01000911
56083
Actinomycetota
CGA
Ser
>WENV183591800
OOCY01001043
175843
Actinomycetota
CAA
Leu
>WENV183591825
OOCY01001201
280544
Actinomycetota
GTG
His
>WENV183591832
OOCY01001266
280498
Actinomycetota
GTT
Asn
>WENV183591851
OOCY01001373
176638
Actinomycetota
GGG
Pro
>WENV183591862
OOCY01001441
147806
Actinomycetota
TAA
Leu
>WENV183591863
OOCY01001445
295964
Actinomycetota
GTT
Asn
>WENV183591893
OOCY01001675
176723
Actinomycetota
TCT
Arg
>WENV183591922
OOCY01002149
176642
Actinomycetota
CAA
Leu
>WENV183592062
OOCY01009684
175883
Actinomycetota
GAT
Ile
>WENV183592091
OOCY01013570
295964
Actinomycetota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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