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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183593113
OOCZ01015983
175837
Actinomycetota
ACG
Arg
>WENV183592935
OOCZ01006296
175843
Actinomycetota
CAA
Leu
>WENV183592649
OOCZ01001299
104211
Actinomycetota
CAG
Leu
>WENV183592651
OOCZ01001307
176499
Actinomycetota
CAT
Met
>WENV183592631
OOCZ01001155
480329
Actinomycetota
CCC
Gly
>WENV183592673
OOCZ01001409
317680
Actinomycetota
CCG
Arg
>WENV183592843
OOCZ01004121
280499
Actinomycetota
CCT
Arg
>WENV183592702
OOCZ01001764
46642
Actinomycetota
CGA
Ser
>WENV183593026
OOCZ01009730
280470
Actinomycetota
CGT
Thr
>WENV183592852
OOCZ01004427
280489
Actinomycetota
CTC
Glu
>WENV183592853
OOCZ01004427
398853
Actinomycetota
CTG
Gln
>WENV183593125
OOCZ01017709
222475
Actinomycetota
CTT
Lys
>WENV183593313
OOCZ01072062
21508
Actinomycetota
GAG
Leu
>WENV183592956
OOCZ01006891
20209
Actinomycetota
GAG
Leu
>WENV183592653
OOCZ01001312
20205
Actinomycetota
GCT
Ser
>WENV183592873
OOCZ01004752
280523
Actinomycetota
GGC
Ala
>WENV183593088
OOCZ01014156
280523
Actinomycetota
GGC
Ala
>WENV183592650
OOCZ01001307
117903
Actinomycetota
GTA
Tyr
>WENV183593122
OOCZ01017262
175872
Actinomycetota
GTC
Asp
>WENV183593123
OOCZ01017316
280498
Actinomycetota
GTT
Asn
>WENV183593084
OOCZ01013703
147806
Actinomycetota
TAA
Leu
>WENV183593290
OOCZ01058013
179231
Actinomycetota
TAC
Val
>WENV183593027
OOCZ01009730
140768
Actinomycetota
TAG
Leu
>WENV183593081
OOCZ01013349
175841
Actinomycetota
TAT
Ile
>WENV183593014
OOCZ01008840
176075
Actinomycetota
TCT
Arg
>WENV183592659
OOCZ01001335
56071
Actinomycetota
TGA
Ser
>WENV183592872
OOCZ01004752
280524
Actinomycetota
TGC
Ala
>WENV183593087
OOCZ01014044
480319
Actinomycetota
TTG
Gln
>WENV183592717
OOCZ01001958
280450
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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