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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183596173
OODE01000001
147806
Actinomycetota
TAA
Leu
>WENV183596176
OODE01000001
280498
Actinomycetota
GTT
Asn
>WENV183596177
OODE01000001
280498
Actinomycetota
GTT
Asn
>WENV183596179
OODE01000001
280498
Actinomycetota
GTT
Asn
>WENV183596185
OODE01000001
176638
Actinomycetota
GGG
Pro
>WENV183596178
OODE01000001
280523
Actinomycetota
GGC
Ala
>WENV183596175
OODE01000001
175882
Actinomycetota
TGG
Pro
>WENV183596174
OODE01000001
176642
Actinomycetota
CAA
Leu
>WENV183596190
OODE01000002
140768
Actinomycetota
TAG
Leu
>WENV183596191
OODE01000002
280450
Actinomycetota
TTT
Lys
>WENV183596187
OODE01000002
280489
Actinomycetota
CTC
Glu
>WENV183596188
OODE01000002
398853
Actinomycetota
CTG
Gln
>WENV183596189
OODE01000002
280470
Actinomycetota
CGT
Thr
>WENV183596201
OODE01000009
56083
Actinomycetota
CGA
Ser
>WENV183596205
OODE01000009
176077
Actinomycetota
CAT
Met
>WENV183596207
OODE01000009
398948
Actinomycetota
TTC
Glu
>WENV183596206
OODE01000009
280703
Actinomycetota
CCT
Arg
>WENV183596202
OODE01000009
56075
Actinomycetota
TGA
Ser
>WENV183596209
OODE01000011
480319
Actinomycetota
TTG
Gln
>WENV183596216
OODE01000012
176555
Actinomycetota
CAT
Met
>WENV183596213
OODE01000012
56166
Actinomycetota
TGA
Ser
>WENV183596212
OODE01000012
46642
Actinomycetota
CGA
Ser
>WENV183596219
OODE01000013
317680
Actinomycetota
CCG
Arg
>WENV183596236
OODE01000028
179231
Actinomycetota
TAC
Val
>WENV183596237
OODE01000028
280499
Actinomycetota
CCT
Arg
>WENV183596245
OODE01000035
150272
Actinomycetota
TAA
Leu
>WENV183596249
OODE01000039
280524
Actinomycetota
TGC
Ala
>WENV183596250
OODE01000039
280523
Actinomycetota
GGC
Ala
>WENV183596252
OODE01000039
480329
Actinomycetota
CCC
Gly
>WENV183596247
OODE01000039
104211
Actinomycetota
CAG
Leu
>WENV183596257
OODE01000042
176075
Actinomycetota
TCT
Arg
>WENV183596258
OODE01000042
280544
Actinomycetota
GTG
His
>WENV183596261
OODE01000045
117777
Actinomycetota
>WENV183596260
OODE01000045
398853
Actinomycetota
CTG
Gln
>WENV183596267
OODE01000049
175837
Actinomycetota
ACG
Arg
>WENV183596268
OODE01000049
175837
Actinomycetota
ACG
Arg
>WENV183596272
OODE01000051
222475
Actinomycetota
CTT
Lys
>WENV183596276
OODE01000056
191955
Actinomycetota
TGT
Thr
>WENV183596279
OODE01000060
99865
Actinomycetota
CAG
Leu
>WENV183596278
OODE01000060
480376
Actinomycetota
CCC
Gly
>WENV183596329
OODE01000119
176499
Actinomycetota
CAT
Met
>WENV183596328
OODE01000119
117903
Actinomycetota
GTA
Tyr
>WENV183596335
OODE01000120
140768
Actinomycetota
TAG
Leu
>WENV183596333
OODE01000120
280549
Actinomycetota
CAC
Val
>WENV183596336
OODE01000120
280496
Actinomycetota
CGT
Thr
>WENV183596334
OODE01000120
323758
Actinomycetota
CGT
Thr
>WENV183596366
OODE01000179
184157
Actinomycetota
TGG
Pro
>WENV183596368
OODE01000179
175843
Actinomycetota
CAA
Leu
>WENV183596381
OODE01000197
176078
Actinomycetota
GGG
Pro
>WENV183596450
OODE01000336
317680
Actinomycetota
CCG
Arg
>WENV183596452
OODE01000337
175907
Actinomycetota
TAC
Val
>WENV183596505
OODE01000473
176723
Actinomycetota
TCT
Arg
>WENV183596553
OODE01000787
482604
Actinomycetota
TTG
Gln
>WENV183596554
OODE01000787
280702
Actinomycetota
GGC
Ala
>WENV183596568
OODE01000909
175837
Actinomycetota
ACG
Arg
>WENV183596618
OODE01001208
280503
Actinomycetota
CCT
Arg
>WENV183596659
OODE01001518
29393
Actinomycetota
GCT
Ser
>WENV183596658
OODE01001518
175949
Actinomycetota
CAT
Met
>WENV183596667
OODE01001617
20208
Actinomycetota
GAG
Leu
>WENV183596771
OODE01003343
175926
Actinomycetota
CAT
Met
>WENV183596903
OODE01006510
291585
Actinomycetota
GCC
Gly
>WENV183596913
OODE01006976
175883
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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