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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183597901
OODF01011153
37070
Actinomycetota
CGA
Ser
>WENV183597693
OODF01002450
235174
Actinomycetota
TGC
Ala
>WENV183597969
OODF01019604
254857
Actinomycetota
CCG
Arg
>WENV183597703
OODF01002616
98279
Actinomycetota
GTA
Tyr
>WENV183597932
OODF01014431
338148
Actinomycetota
CTG
Gln
>WENV183597888
OODF01010217
235148
Actinomycetota
GTT
Asn
>WENV183597821
OODF01006751
176456
Actinomycetota
TCT
Arg
>WENV183597972
OODF01021075
145347
Actinomycetota
CAA
Leu
>WENV183597858
OODF01008157
113601
Actinomycetota
TAG
Leu
>WENV183597774
OODF01005152
235149
Actinomycetota
CCT
Arg
>WENV183597992
OODF01026544
145269
Actinomycetota
CAT
Met
>WENV183597857
OODF01008157
235121
Actinomycetota
CGT
Thr
>WENV183597980
OODF01022478
119485
Actinomycetota
TAA
Leu
>WENV183597694
OODF01002450
235173
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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