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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183599476
OODH01000884
280524
Actinomycetota
TGC
Ala
>WENV183599477
OODH01000884
280523
Actinomycetota
GGC
Ala
>WENV183599567
OODH01001800
280450
Actinomycetota
TTT
Lys
>WENV183599609
OODH01002475
99865
Actinomycetota
CAG
Leu
>WENV183599613
OODH01002520
280499
Actinomycetota
CCT
Arg
>WENV183599625
OODH01002709
46642
Actinomycetota
CGA
Ser
>WENV183599693
OODH01004136
56166
Actinomycetota
TGA
Ser
>WENV183599755
OODH01006563
117903
Actinomycetota
GTA
Tyr
>WENV183599756
OODH01006563
176499
Actinomycetota
CAT
Met
>WENV183599783
OODH01008132
179231
Actinomycetota
TAC
Val
>WENV183599792
OODH01008556
280498
Actinomycetota
GTT
Asn
>WENV183599847
OODH01013809
175882
Actinomycetota
TGG
Pro
>WENV183599850
OODH01014132
398853
Actinomycetota
CTG
Gln
>WENV183599873
OODH01016108
175837
Actinomycetota
ACG
Arg
>WENV183599886
OODH01018064
280470
Actinomycetota
CGT
Thr
>WENV183599897
OODH01019082
480329
Actinomycetota
CCC
Gly
>WENV183599919
OODH01022610
176075
Actinomycetota
TCT
Arg
>WENV183600012
OODH01037937
147806
Actinomycetota
TAA
Leu
>WENV183600038
OODH01043676
280441
Actinomycetota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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