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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183602517
OODK01000004
175882
Actinomycetota
TGG
Pro
>WENV183602518
OODK01000004
280498
Actinomycetota
GTT
Asn
>WENV183602519
OODK01000004
280498
Actinomycetota
GTT
Asn
>WENV183602520
OODK01000004
280523
Actinomycetota
GGC
Ala
>WENV183602521
OODK01000004
280498
Actinomycetota
GTT
Asn
>WENV183602527
OODK01000004
176638
Actinomycetota
GGG
Pro
>WENV183602528
OODK01000004
480319
Actinomycetota
TTG
Gln
>WENV183602578
OODK01000018
46642
Actinomycetota
CGA
Ser
>WENV183602580
OODK01000018
280489
Actinomycetota
CTC
Glu
>WENV183602581
OODK01000018
398853
Actinomycetota
CTG
Gln
>WENV183602582
OODK01000018
280470
Actinomycetota
CGT
Thr
>WENV183602583
OODK01000018
140768
Actinomycetota
TAG
Leu
>WENV183602586
OODK01000018
117903
Actinomycetota
GTA
Tyr
>WENV183602587
OODK01000018
176499
Actinomycetota
CAT
Met
>WENV183602607
OODK01000032
56166
Actinomycetota
TGA
Ser
>WENV183602610
OODK01000032
176555
Actinomycetota
CAT
Met
>WENV183602615
OODK01000035
203883
Actinomycetota
TCT
Arg
>WENV183602645
OODK01000054
280450
Actinomycetota
TTT
Lys
>WENV183602651
OODK01000059
179231
Actinomycetota
TAC
Val
>WENV183602675
OODK01000077
280441
Actinomycetota
CCG
Arg
>WENV183602680
OODK01000082
147806
Actinomycetota
TAA
Leu
>WENV183602681
OODK01000082
176642
Actinomycetota
CAA
Leu
>WENV183602683
OODK01000088
104211
Actinomycetota
CAG
Leu
>WENV183602685
OODK01000088
280524
Actinomycetota
TGC
Ala
>WENV183602686
OODK01000088
280523
Actinomycetota
GGC
Ala
>WENV183602688
OODK01000088
480329
Actinomycetota
CCC
Gly
>WENV183602751
OODK01000146
280499
Actinomycetota
CCT
Arg
>WENV183603153
OODK01000845
99865
Actinomycetota
CAG
Leu
>WENV183603154
OODK01000845
480376
Actinomycetota
CCC
Gly
>WENV183603214
OODK01001208
280703
Actinomycetota
CCT
Arg
>WENV183603218
OODK01001235
56083
Actinomycetota
CGA
Ser
>WENV183603231
OODK01001360
280496
Actinomycetota
CGT
Thr
>WENV183603266
OODK01001598
59689
Actinomycetota
GGA
Ser
>WENV183603267
OODK01001598
175949
Actinomycetota
CAT
Met
>WENV183603333
OODK01002391
175907
Actinomycetota
TAC
Val
>WENV183603378
OODK01003660
56075
Actinomycetota
TGA
Ser
>WENV183603394
OODK01004152
200276
Actinomycetota
CTT
Lys
>WENV183603402
OODK01004548
150272
Actinomycetota
TAA
Leu
>WENV183603408
OODK01004635
176077
Actinomycetota
CAT
Met
>WENV183603429
OODK01005248
175843
Actinomycetota
CAA
Leu
>WENV183603430
OODK01005252
175837
Actinomycetota
ACG
Arg
>WENV183603496
OODK01010427
280702
Actinomycetota
GGC
Ala
>WENV183603537
OODK01015867
29393
Actinomycetota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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