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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183608297
OODP01004528
117777
Actinomycetota
>WENV183608202
OODP01001844
175843
Actinomycetota
CAA
Leu
>WENV183608298
OODP01004528
176499
Actinomycetota
CAT
Met
>WENV183608467
OODP01019801
178569
Actinomycetota
CAT
Met
>WENV183608230
OODP01002492
480329
Actinomycetota
CCC
Gly
>WENV183608347
OODP01007012
56383
Actinomycetota
CGA
Ser
>WENV183608339
OODP01006231
280470
Actinomycetota
CGT
Thr
>WENV183608295
OODP01004506
289788
Actinomycetota
CTC
Glu
>WENV183608296
OODP01004506
398853
Actinomycetota
CTG
Gln
>WENV183608264
OODP01003495
184564
Actinomycetota
CTT
Lys
>WENV183608359
OODP01007994
20415
Actinomycetota
GAG
Leu
>WENV183608354
OODP01007675
179238
Actinomycetota
GAT
Ile
>WENV183608320
OODP01005783
20205
Actinomycetota
GCT
Ser
>WENV183608345
OODP01006720
280523
Actinomycetota
GGC
Ala
>WENV183608427
OODP01014712
176078
Actinomycetota
GGG
Pro
>WENV183608431
OODP01015133
283312
Actinomycetota
GTG
His
>WENV183608309
OODP01005123
295964
Actinomycetota
GTT
Asn
>WENV183608476
OODP01022060
140878
Actinomycetota
TAA
Leu
>WENV183608355
OODP01007675
280524
Actinomycetota
TGC
Ala
>WENV183608341
OODP01006290
398948
Actinomycetota
TTC
Glu
>WENV183608242
OODP01002790
280450
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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