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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183635734
OOIX01000074
283329
Actinomycetota
GTG
His
>WENV183635739
OOIX01000177
100162
Actinomycetota
TGA
Ser
>WENV183635743
OOIX01000298
300986
Actinomycetota
ACG
Arg
>WENV183635748
OOIX01000542
178579
Actinomycetota
GTC
Asp
>WENV183635749
OOIX01000542
178580
Actinomycetota
GAA
Phe
>WENV183635750
OOIX01000684
178802
Actinomycetota
TAA
Leu
>WENV183635754
OOIX01000971
118279
Actinomycetota
GTA
Tyr
>WENV183635755
OOIX01000971
283336
Actinomycetota
GGT
Thr
>WENV183635756
OOIX01000971
399203
Actinomycetota
CAT
Met
>WENV183635757
OOIX01001122
178582
Actinomycetota
TTT
Lys
>WENV183635758
OOIX01001167
56387
Actinomycetota
CGA
Ser
>WENV183635768
OOIX01002218
504131
Actinomycetota
GCA
Cys
>WENV183635769
OOIX01002218
400421
Actinomycetota
GAC
Val
>WENV183635770
OOIX01002386
283322
Actinomycetota
CGT
Thr
>WENV183635772
OOIX01002584
499385
Actinomycetota
CCC
Gly
>WENV183635780
OOIX01006601
144155
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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