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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183638327
OQVH01026032
179231
Actinomycetota
TAC
Val
>WENV183638108
OQVH01009165
176499
Actinomycetota
CAT
Met
>WENV183638164
OQVH01011320
280498
Actinomycetota
GTT
Asn
>WENV183638222
OQVH01014929
459899
Actinomycetota
TTC
Glu
>WENV183638426
OQVH01044962
140768
Actinomycetota
TAG
Leu
>WENV183638329
OQVH01026387
175837
Actinomycetota
ACG
Arg
>WENV183638412
OQVH01042456
398843
Actinomycetota
GTT
Asn
>WENV183638345
OQVH01028835
241064
Actinomycetota
CTC
Glu
>WENV183638188
OQVH01012371
176638
Actinomycetota
GGG
Pro
>WENV183638377
OQVH01034251
175841
Actinomycetota
TAT
Ile
>WENV183638223
OQVH01014929
175872
Actinomycetota
GTC
Asp
>WENV183638117
OQVH01009495
20205
Actinomycetota
GCT
Ser
>WENV183638440
OQVH01047376
175926
Actinomycetota
CAT
Met
>WENV183638371
OQVH01033073
280450
Actinomycetota
TTT
Lys
>WENV183638374
OQVH01033442
56166
Actinomycetota
TGA
Ser
>WENV183638207
OQVH01013866
358727
Actinomycetota
CCG
Arg
>WENV183638387
OQVH01036415
480329
Actinomycetota
CCC
Gly
>WENV183638344
OQVH01028835
483206
Actinomycetota
CTG
Gln
>WENV183637977
OQVH01004675
175882
Actinomycetota
TGG
Pro
>WENV183638358
OQVH01031209
20209
Actinomycetota
GAG
Leu
>WENV183638199
OQVH01013496
480319
Actinomycetota
TTG
Gln
>WENV183638282
OQVH01021719
280489
Actinomycetota
CTC
Glu
>WENV183637927
OQVH01003698
280499
Actinomycetota
CCT
Arg
>WENV183638283
OQVH01021719
398853
Actinomycetota
CTG
Gln
>WENV183638260
OQVH01018438
175843
Actinomycetota
CAA
Leu
>WENV183638203
OQVH01013787
46642
Actinomycetota
CGA
Ser
>WENV183638458
OQVH01056216
104211
Actinomycetota
CAG
Leu
>WENV183638107
OQVH01009165
117903
Actinomycetota
GTA
Tyr
>WENV183638186
OQVH01012346
147796
Actinomycetota
TAA
Leu
>WENV183638425
OQVH01044962
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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