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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183639135
OQVI01004480
280503
Actinomycetota
CCT
Arg
>WENV183639349
OQVI01009902
291585
Actinomycetota
GCC
Gly
>WENV183639425
OQVI01012935
483206
Actinomycetota
CTG
Gln
>WENV183639514
OQVI01018780
280524
Actinomycetota
TGC
Ala
>WENV183639646
OQVI01032490
176077
Actinomycetota
CAT
Met
>WENV183639670
OQVI01035287
398843
Actinomycetota
GTT
Asn
>WENV183639671
OQVI01035287
398843
Actinomycetota
GTT
Asn
>WENV183639675
OQVI01036645
56083
Actinomycetota
CGA
Ser
>WENV183639678
OQVI01036860
59689
Actinomycetota
GGA
Ser
>WENV183639692
OQVI01039606
280536
Actinomycetota
CTT
Lys
>WENV183639710
OQVI01044054
280496
Actinomycetota
CGT
Thr
>WENV183639731
OQVI01048172
191955
Actinomycetota
TGT
Thr
>WENV183639763
OQVI01055979
222475
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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