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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183726937
PJTO01000724
340609
Actinomycetota
GCC
Gly
>WENV183726940
PJTO01000724
347986
Actinomycetota
CAC
Val
>WENV183726869
PJTO01000314
243493
Actinomycetota
CCT
Arg
>WENV183727193
PJTO01011607
105043
Actinomycetota
TAG
Leu
>WENV183727004
PJTO01001576
251199
Actinomycetota
TTT
Lys
>WENV183726903
PJTO01000464
412084
Actinomycetota
CCC
Gly
>WENV183726880
PJTO01000336
162442
Actinomycetota
GAT
Ile
>WENV183727319
PJTO01027016
148837
Actinomycetota
CAT
Met
>WENV183727161
PJTO01008467
237513
Actinomycetota
ACG
Arg
>WENV183727381
PJTO01039322
12308
Actinomycetota
GCT
Ser
>WENV183727422
PJTO01052655
342999
Actinomycetota
GGT
Thr
>WENV183727050
PJTO01002803
412879
Actinomycetota
TCC
Gly
>WENV183726787
PJTO01000173
269853
Actinomycetota
CTC
Glu
>WENV183726786
PJTO01000173
338297
Actinomycetota
CTG
Gln
>WENV183726941
PJTO01000725
193267
Actinomycetota
CAA
Leu
>WENV183726897
PJTO01000408
82645
Actinomycetota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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