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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1002931
SRR002326.107401
283405
Actinomycetota
CGT
Thr
>SRA1003035
SRR002326.163656
414769
Actinomycetota
CCT
Arg
>SRA1003043
SRR002326.166282
414769
Actinomycetota
CCT
Arg
>SRA1003074
SRR002326.182963
177601
Actinomycetota
CAT
Met
>SRA1003081
SRR002326.186805
177601
Actinomycetota
CAT
Met
>SRA1003244
SRR002326.333605
177601
Actinomycetota
CAT
Met
>SRA1003269
SRR002326.353682
283405
Actinomycetota
CGT
Thr
>SRA1003311
SRR002326.383702
400295
Actinomycetota
GAC
Val
>SRA1003469
SRR002326.487866
400295
Actinomycetota
GAC
Val
>SRA1002865
SRR002326.64951
176331
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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