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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170388383
CETZ01078431
481098
Alphaproteobacteria
CTG
Gln
>WENV170388442
CETZ01085501
178731
Alphaproteobacteria
GTC
Asp
>WENV170388464
CETZ01088444
480900
Alphaproteobacteria
GCA
Cys
>WENV170388586
CETZ01102210
193463
Alphaproteobacteria
CCT
Arg
>WENV170388682
CETZ01113542
178734
Alphaproteobacteria
TGG
Pro
>WENV170388681
CETZ01113542
178733
Alphaproteobacteria
CAT
Met
>WENV170388735
CETZ01119857
305449
Alphaproteobacteria
CGT
Thr
>WENV170388924
CETZ01170303
282981
Alphaproteobacteria
CCA
Trp
>WENV170389008
CETZ01202268
118150
Alphaproteobacteria
TAG
Leu
>WENV170389095
CETZ01231738
338616
Alphaproteobacteria
TGC
Ala
>WENV170389114
CETZ01237945
400106
Alphaproteobacteria
GTT
Asn
>WENV170389132
CETZ01245414
400544
Alphaproteobacteria
GGT
Thr
>WENV170389140
CETZ01247381
195445
Alphaproteobacteria
CAT
Met
>WENV170389168
CETZ01255241
121250
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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