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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170574266
FLYM01019593
34670
Alphaproteobacteria
CGA
Ser
>WENV170574471
FLYM01043099
335303
Alphaproteobacteria
TGC
Ala
>WENV170574331
FLYM01026500
188967
Alphaproteobacteria
TTT
Lys
>WENV170574473
FLYM01043198
300472
Alphaproteobacteria
GAA
Phe
>WENV170574182
FLYM01011756
75222
Alphaproteobacteria
GAG
Leu
>WENV170574217
FLYM01014535
75222
Alphaproteobacteria
GAG
Leu
>WENV170574250
FLYM01017868
282924
Alphaproteobacteria
CGC
Ala
>WENV170574552
FLYM01058004
282924
Alphaproteobacteria
CGC
Ala
>WENV170574521
FLYM01052359
282748
Alphaproteobacteria
CGT
Thr
>WENV170574410
FLYM01035073
412163
Alphaproteobacteria
GGT
Thr
>WENV170574545
FLYM01056804
454954
Alphaproteobacteria
CAC
Val
>WENV170574157
FLYM01009741
454954
Alphaproteobacteria
CAC
Val
>WENV170574393
FLYM01033285
454954
Alphaproteobacteria
CAC
Val
>WENV170574341
FLYM01027091
427571
Alphaproteobacteria
GCC
Gly
>WENV170574457
FLYM01040619
427571
Alphaproteobacteria
GCC
Gly
>WENV170574472
FLYM01043101
427571
Alphaproteobacteria
GCC
Gly
>WENV170574494
FLYM01047467
400249
Alphaproteobacteria
GCC
Gly
>WENV170574422
FLYM01036230
400186
Alphaproteobacteria
GTT
Asn
>WENV170574303
FLYM01024550
178337
Alphaproteobacteria
GTG
His
>WENV170574465
FLYM01041558
282749
Alphaproteobacteria
CGC
Ala
>WENV170574542
FLYM01056187
282923
Alphaproteobacteria
CTT
Lys
>WENV170574456
FLYM01040549
29655
Alphaproteobacteria
TGA
Ser
>WENV170574396
FLYM01033864
29645
Alphaproteobacteria
CGA
Ser
>WENV170574126
FLYM01008387
76550
Alphaproteobacteria
CAG
Leu
>WENV170574299
FLYM01024174
31653
Alphaproteobacteria
GGA
Ser
>WENV170574484
FLYM01045498
447674
Alphaproteobacteria
CAC
Val
>WENV170574239
FLYM01016565
399350
Alphaproteobacteria
TTG
Gln
>WENV170574066
FLYM01003141
480946
Alphaproteobacteria
TTG
Gln
>WENV170574364
FLYM01029701
480946
Alphaproteobacteria
TTG
Gln
>WENV170574562
FLYM01060303
480946
Alphaproteobacteria
TTG
Gln
>WENV170574569
FLYM01061392
184816
Alphaproteobacteria
GTG
His
>WENV170574388
FLYM01032501
310632
Alphaproteobacteria
TGT
Thr
>WENV170574203
FLYM01013287
118150
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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