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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183618881
OOFP01002425
140876
Alphaproteobacteria
>WENV183618842
OOFP01000652
186414
Alphaproteobacteria
CAT
Met
>WENV183619106
OOFP01026409
281650
Alphaproteobacteria
CCA
Trp
>WENV183618873
OOFP01002270
400930
Alphaproteobacteria
GAA
Phe
>WENV183618930
OOFP01004864
29841
Alphaproteobacteria
GGA
Ser
>WENV183618926
OOFP01004351
398999
Alphaproteobacteria
GGT
Thr
>WENV183619112
OOFP01028402
398994
Alphaproteobacteria
GTT
Asn
>WENV183619027
OOFP01016522
281676
Alphaproteobacteria
TAC
Val
>WENV183619057
OOFP01021228
118213
Alphaproteobacteria
TAG
Leu
>WENV183619083
OOFP01024479
481268
Alphaproteobacteria
TCC
Gly
>WENV183618988
OOFP01011408
283556
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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