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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183621416
OOFU01000578
329227
Alphaproteobacteria
TGC
Ala
>WENV183621467
OOFU01001921
400930
Alphaproteobacteria
GAA
Phe
>WENV183621539
OOFU01005480
398994
Alphaproteobacteria
GTT
Asn
>WENV183621601
OOFU01013607
329227
Alphaproteobacteria
TGC
Ala
>WENV183621606
OOFU01014432
215287
Alphaproteobacteria
GGG
Pro
>WENV183621610
OOFU01015004
281676
Alphaproteobacteria
TAC
Val
>WENV183621657
OOFU01024300
481268
Alphaproteobacteria
TCC
Gly
>WENV183621704
OOFU01034726
329227
Alphaproteobacteria
TGC
Ala
>WENV183621717
OOFU01038409
215287
Alphaproteobacteria
GGG
Pro
>WENV183621720
OOFU01039680
178725
Alphaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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