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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183625088
OOGF01000528
186414
Alphaproteobacteria
CAT
Met
>WENV183625152
OOGF01001689
140876
Alphaproteobacteria
>WENV183625159
OOGF01001981
281676
Alphaproteobacteria
TAC
Val
>WENV183625168
OOGF01002308
29841
Alphaproteobacteria
GGA
Ser
>WENV183625281
OOGF01009036
405688
Alphaproteobacteria
GTT
Asn
>WENV183625293
OOGF01009835
215287
Alphaproteobacteria
GGG
Pro
>WENV183625410
OOGF01025392
100185
Alphaproteobacteria
GAG
Leu
>WENV183625520
OOGF01049426
398996
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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