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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183636440
OOKD01001298
99726
Alphaproteobacteria
TAG
Leu
>WENV183636530
OOKD01062056
340956
Alphaproteobacteria
TTG
Gln
>WENV183636354
OOKD01000072
294221
Alphaproteobacteria
GAA
Phe
>WENV183636480
OOKD01007177
340310
Alphaproteobacteria
CAC
Val
>WENV183636458
OOKD01003136
146854
Alphaproteobacteria
CCT
Arg
>WENV183636553
OOKD01141503
95924
Alphaproteobacteria
GAG
Leu
>WENV183636436
OOKD01001193
338268
Alphaproteobacteria
GAC
Val
>WENV183636507
OOKD01023691
166801
Alphaproteobacteria
TCG
Arg
>WENV183636454
OOKD01002360
237479
Alphaproteobacteria
TTT
Lys
>WENV183636471
OOKD01005391
23611
Alphaproteobacteria
CGA
Ser
>WENV183636473
OOKD01005648
239160
Alphaproteobacteria
CGT
Thr
>WENV183636493
OOKD01012447
96061
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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