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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183724144
PJQE01000364
178240
Alphaproteobacteria
GTC
Asp
>WENV183724145
PJQE01000372
320067
Alphaproteobacteria
CGC
Ala
>WENV183724157
PJQE01000539
400222
Alphaproteobacteria
GCC
Gly
>WENV183724169
PJQE01000716
178239
Alphaproteobacteria
TAC
Val
>WENV183724209
PJQE01001515
282960
Alphaproteobacteria
CCA
Trp
>WENV183724212
PJQE01001616
480960
Alphaproteobacteria
GCA
Cys
>WENV183724213
PJQE01001616
399879
Alphaproteobacteria
GTT
Asn
>WENV183724227
PJQE01002186
400223
Alphaproteobacteria
GGT
Thr
>WENV183724231
PJQE01002557
283560
Alphaproteobacteria
CTT
Lys
>WENV183724250
PJQE01003513
178252
Alphaproteobacteria
TGG
Pro
>WENV183724253
PJQE01003692
178246
Alphaproteobacteria
TCT
Arg
>WENV183724256
PJQE01003795
406705
Alphaproteobacteria
GAC
Val
>WENV183724277
PJQE01004284
481048
Alphaproteobacteria
GCA
Cys
>WENV183724303
PJQE01005820
118146
Alphaproteobacteria
GAG
Leu
>WENV183724329
PJQE01007334
233665
Alphaproteobacteria
CCT
Arg
>WENV183724344
PJQE01008314
118145
Alphaproteobacteria
TAG
Leu
>WENV183724352
PJQE01008702
282966
Alphaproteobacteria
TTT
Lys
>WENV183724375
PJQE01010672
480958
Alphaproteobacteria
CTG
Gln
>WENV183724407
PJQE01012125
431636
Alphaproteobacteria
CTC
Glu
>WENV183724411
PJQE01012232
118147
Alphaproteobacteria
CAA
Leu
>WENV183724473
PJQE01019235
399340
Alphaproteobacteria
GTT
Asn
>WENV183724551
PJQE01027596
182365
Alphaproteobacteria
TCG
Arg
>WENV183724616
PJQE01035729
29652
Alphaproteobacteria
CGA
Ser
>WENV183724658
PJQE01042062
481802
Alphaproteobacteria
TCC
Gly
>WENV183724704
PJQE01052050
179883
Alphaproteobacteria
CCA
Trp
>WENV183724720
PJQE01055083
400216
Alphaproteobacteria
TTG
Gln
>WENV183724784
PJQE01067218
29653
Alphaproteobacteria
TGA
Ser
>WENV183724815
PJQE01073269
400419
Alphaproteobacteria
TTG
Gln
>WENV183724966
PJQE01111193
178733
Alphaproteobacteria
CAT
Met
>WENV183725062
PJQE01142876
282748
Alphaproteobacteria
CGT
Thr
>WENV183725079
PJQE01145982
180026
Alphaproteobacteria
CCT
Arg
>WENV183725114
PJQE01157630
488318
Alphaproteobacteria
TCC
Gly
>WENV183725125
PJQE01160243
353624
Alphaproteobacteria
CCA
Trp
>WENV183725137
PJQE01165203
178062
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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