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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183725613
PJQF01003775
288727
Alphaproteobacteria
>WENV183725692
PJQF01008121
188085
Alphaproteobacteria
GTC
Asp
>WENV183725744
PJQF01011938
156124
Alphaproteobacteria
GGG
Pro
>WENV183725775
PJQF01015265
178240
Alphaproteobacteria
GTC
Asp
>WENV183725796
PJQF01017831
400223
Alphaproteobacteria
GGT
Thr
>WENV183725799
PJQF01018142
282980
Alphaproteobacteria
TGT
Thr
>WENV183725803
PJQF01018462
400190
Alphaproteobacteria
>WENV183725806
PJQF01019126
187024
Alphaproteobacteria
TCT
Arg
>WENV183725866
PJQF01028407
29655
Alphaproteobacteria
TGA
Ser
>WENV183725900
PJQF01033406
296763
Alphaproteobacteria
CCA
Trp
>WENV183725910
PJQF01036722
480900
Alphaproteobacteria
GCA
Cys
>WENV183725925
PJQF01039605
400069
Alphaproteobacteria
CAC
Val
>WENV183725934
PJQF01040913
481423
Alphaproteobacteria
CTG
Gln
>WENV183725943
PJQF01042822
184517
Alphaproteobacteria
GGG
Pro
>WENV183725963
PJQF01049842
400945
Alphaproteobacteria
GCC
Gly
>WENV183726004
PJQF01058833
281409
Alphaproteobacteria
TTT
Lys
>WENV183726007
PJQF01059496
29652
Alphaproteobacteria
CGA
Ser
>WENV183726019
PJQF01060479
118150
Alphaproteobacteria
TAG
Leu
>WENV183726020
PJQF01060749
406748
Alphaproteobacteria
TAC
Val
>WENV183726048
PJQF01068311
283559
Alphaproteobacteria
CGC
Ala
>WENV183726075
PJQF01075147
404744
Alphaproteobacteria
GCC
Gly
>WENV183726084
PJQF01077746
73440
Alphaproteobacteria
CAG
Leu
>WENV183726139
PJQF01092379
404744
Alphaproteobacteria
GCC
Gly
>WENV183726162
PJQF01097818
118316
Alphaproteobacteria
CAA
Leu
>WENV183726170
PJQF01100507
283398
Alphaproteobacteria
TGC
Ala
>WENV183726189
PJQF01106824
29653
Alphaproteobacteria
TGA
Ser
>WENV183726208
PJQF01118894
399879
Alphaproteobacteria
GTT
Asn
>WENV183726216
PJQF01122347
178252
Alphaproteobacteria
TGG
Pro
>WENV183726222
PJQF01125144
480900
Alphaproteobacteria
GCA
Cys
>WENV183726225
PJQF01125741
118482
Alphaproteobacteria
CAG
Leu
>WENV183726259
PJQF01140190
100383
Alphaproteobacteria
GTA
Tyr
>WENV183726279
PJQF01145181
118147
Alphaproteobacteria
CAA
Leu
>WENV183726283
PJQF01146687
481099
Alphaproteobacteria
TCC
Gly
>WENV183726363
PJQF01173805
180026
Alphaproteobacteria
CCT
Arg
>WENV183726391
PJQF01182676
118277
Alphaproteobacteria
TAG
Leu
>WENV183726442
PJQF01200549
399408
Alphaproteobacteria
TGT
Thr
>WENV183726471
PJQF01215574
76487
Alphaproteobacteria
GAG
Leu
>WENV183726479
PJQF01218132
480958
Alphaproteobacteria
CTG
Gln
>WENV183726485
PJQF01219114
400222
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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