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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183736747
PJUD01000012
77010
Alphaproteobacteria
GAG
Leu
>WENV183736748
PJUD01000012
106524
Alphaproteobacteria
GTA
Tyr
>WENV183736906
PJUD01000093
30668
Alphaproteobacteria
CGA
Ser
>WENV183736918
PJUD01000100
179894
Alphaproteobacteria
CCG
Arg
>WENV183738253
PJUD01137780
176225
Alphaproteobacteria
TGG
Pro
>WENV183738198
PJUD01116451
401056
Alphaproteobacteria
TTC
Glu
>WENV183738229
PJUD01128293
178369
Alphaproteobacteria
CGG
Pro
>WENV183737779
PJUD01032824
404592
Alphaproteobacteria
GGT
Thr
>WENV183736883
PJUD01000078
178050
Alphaproteobacteria
GTG
His
>WENV183738031
PJUD01070673
337513
Alphaproteobacteria
TGT
Thr
>WENV183737000
PJUD01000202
400258
Alphaproteobacteria
>WENV183736740
PJUD01000007
284697
Alphaproteobacteria
GAA
Phe
>WENV183736845
PJUD01000055
284697
Alphaproteobacteria
GAA
Phe
>WENV183737359
PJUD01004674
284697
Alphaproteobacteria
GAA
Phe
>WENV183737935
PJUD01053377
179858
Alphaproteobacteria
TCT
Arg
>WENV183736997
PJUD01000198
225944
Alphaproteobacteria
CCT
Arg
>WENV183737292
PJUD01003018
191064
Alphaproteobacteria
CCG
Arg
>WENV183736814
PJUD01000039
100353
Alphaproteobacteria
GTA
Tyr
>WENV183738086
PJUD01080513
480418
Alphaproteobacteria
GCA
Cys
>WENV183736834
PJUD01000051
285028
Alphaproteobacteria
CTT
Lys
>WENV183737366
PJUD01004915
285028
Alphaproteobacteria
CTT
Lys
>WENV183736832
PJUD01000050
282748
Alphaproteobacteria
CGT
Thr
>WENV183737869
PJUD01042347
284764
Alphaproteobacteria
CAT
Met
>WENV183737045
PJUD01000301
304844
Alphaproteobacteria
TAC
Val
>WENV183736719
PJUD01000004
399340
Alphaproteobacteria
GTT
Asn
>WENV183737054
PJUD01000309
399340
Alphaproteobacteria
GTT
Asn
>WENV183737055
PJUD01000309
399340
Alphaproteobacteria
GTT
Asn
>WENV183737123
PJUD01000509
399340
Alphaproteobacteria
GTT
Asn
>WENV183737527
PJUD01013119
399340
Alphaproteobacteria
GTT
Asn
>WENV183736947
PJUD01000117
283321
Alphaproteobacteria
CGT
Thr
>WENV183738264
PJUD01140658
118100
Alphaproteobacteria
GTA
Tyr
>WENV183736718
PJUD01000004
283320
Alphaproteobacteria
>WENV183736901
PJUD01000089
400945
Alphaproteobacteria
GCC
Gly
>WENV183737245
PJUD01001781
400945
Alphaproteobacteria
GCC
Gly
>WENV183737766
PJUD01030640
400249
Alphaproteobacteria
GCC
Gly
>WENV183737168
PJUD01000814
101069
Alphaproteobacteria
TAA
Leu
>WENV183736721
PJUD01000004
282749
Alphaproteobacteria
CGC
Ala
>WENV183737034
PJUD01000269
282749
Alphaproteobacteria
CGC
Ala
>WENV183737315
PJUD01003549
282749
Alphaproteobacteria
CGC
Ala
>WENV183737781
PJUD01032985
404744
Alphaproteobacteria
GCC
Gly
>WENV183737076
PJUD01000354
73167
Alphaproteobacteria
GAG
Leu
>WENV183737944
PJUD01055381
29655
Alphaproteobacteria
TGA
Ser
>WENV183737036
PJUD01000275
231487
Alphaproteobacteria
TCT
Arg
>WENV183737011
PJUD01000214
284698
Alphaproteobacteria
TTT
Lys
>WENV183737856
PJUD01040291
29417
Alphaproteobacteria
CGA
Ser
>WENV183736793
PJUD01000030
13331
Alphaproteobacteria
GCT
Ser
>WENV183737037
PJUD01000281
469211
Alphaproteobacteria
>WENV183736716
PJUD01000004
233665
Alphaproteobacteria
CCT
Arg
>WENV183737969
PJUD01058305
354296
Alphaproteobacteria
TAC
Val
>WENV183737581
PJUD01016274
228484
Alphaproteobacteria
CCG
Arg
>WENV183738417
PJUD01193551
400274
Alphaproteobacteria
TTT
Lys
>WENV183736686
PJUD01000001
480900
Alphaproteobacteria
GCA
Cys
>WENV183738382
PJUD01184142
404182
Alphaproteobacteria
CAC
Val
>WENV183737026
PJUD01000252
199536
Alphaproteobacteria
TGG
Pro
>WENV183736729
PJUD01000005
178576
Alphaproteobacteria
ACG
Arg
>WENV183736990
PJUD01000185
178576
Alphaproteobacteria
ACG
Arg
>WENV183736991
PJUD01000185
178576
Alphaproteobacteria
ACG
Arg
>WENV183738080
PJUD01078005
178576
Alphaproteobacteria
ACG
Arg
>WENV183738081
PJUD01078005
178576
Alphaproteobacteria
ACG
Arg
>WENV183736969
PJUD01000138
366050
Alphaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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