This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183739437
PJUE01017086
176233
Alphaproteobacteria
>WENV183739515
PJUE01026675
176233
Alphaproteobacteria
>WENV183739607
PJUE01039683
176233
Alphaproteobacteria
>WENV183738496
PJUE01000006
283320
Alphaproteobacteria
>WENV183738997
PJUE01000808
400190
Alphaproteobacteria
>WENV183738516
PJUE01000009
178576
Alphaproteobacteria
ACG
Arg
>WENV183738934
PJUE01000486
118136
Alphaproteobacteria
CAA
Leu
>WENV183738899
PJUE01000381
78800
Alphaproteobacteria
CAG
Leu
>WENV183739507
PJUE01025000
84860
Alphaproteobacteria
CAG
Leu
>WENV183738462
PJUE01000003
73523
Alphaproteobacteria
CAG
Leu
>WENV183738564
PJUE01000024
201940
Alphaproteobacteria
CAT
Met
>WENV183739429
PJUE01016187
284764
Alphaproteobacteria
CAT
Met
>WENV183738569
PJUE01000024
282977
Alphaproteobacteria
CAT
Met
>WENV183739076
PJUE01001430
282977
Alphaproteobacteria
CAT
Met
>WENV183739117
PJUE01001841
178197
Alphaproteobacteria
CAT
Met
>WENV183738760
PJUE01000173
400188
Alphaproteobacteria
CCC
Gly
>WENV183739587
PJUE01035621
492874
Alphaproteobacteria
CCC
Gly
>WENV183738670
PJUE01000080
228484
Alphaproteobacteria
CCG
Arg
>WENV183739116
PJUE01001833
228484
Alphaproteobacteria
CCG
Arg
>WENV183738494
PJUE01000006
233665
Alphaproteobacteria
CCT
Arg
>WENV183739372
PJUE01011335
29417
Alphaproteobacteria
CGA
Ser
>WENV183738970
PJUE01000678
29645
Alphaproteobacteria
CGA
Ser
>WENV183738839
PJUE01000282
282924
Alphaproteobacteria
CGC
Ala
>WENV183738499
PJUE01000006
282749
Alphaproteobacteria
CGC
Ala
>WENV183739628
PJUE01044189
176230
Alphaproteobacteria
CGG
Pro
>WENV183738545
PJUE01000015
431636
Alphaproteobacteria
CTC
Glu
>WENV183739606
PJUE01039590
431636
Alphaproteobacteria
CTC
Glu
>WENV183739526
PJUE01028443
494510
Alphaproteobacteria
CTG
Gln
>WENV183739071
PJUE01001413
490723
Alphaproteobacteria
CTG
Gln
>WENV183739202
PJUE01003087
282923
Alphaproteobacteria
CTT
Lys
>WENV183739397
PJUE01013741
315952
Alphaproteobacteria
GAA
Phe
>WENV183738535
PJUE01000013
284697
Alphaproteobacteria
GAA
Phe
>WENV183738600
PJUE01000036
284697
Alphaproteobacteria
GAA
Phe
>WENV183739467
PJUE01020415
284697
Alphaproteobacteria
GAA
Phe
>WENV183739001
PJUE01000853
301758
Alphaproteobacteria
GAA
Phe
>WENV183738561
PJUE01000023
77010
Alphaproteobacteria
GAG
Leu
>WENV183738586
PJUE01000031
77010
Alphaproteobacteria
GAG
Leu
>WENV183739644
PJUE01046869
73167
Alphaproteobacteria
GAG
Leu
>WENV183739305
PJUE01006895
480418
Alphaproteobacteria
GCA
Cys
>WENV183738448
PJUE01000001
480900
Alphaproteobacteria
GCA
Cys
>WENV183738727
PJUE01000134
480900
Alphaproteobacteria
GCA
Cys
>WENV183739085
PJUE01001534
427571
Alphaproteobacteria
GCC
Gly
>WENV183739425
PJUE01015547
13331
Alphaproteobacteria
GCT
Ser
>WENV183739529
PJUE01028933
13331
Alphaproteobacteria
GCT
Ser
>WENV183739634
PJUE01045216
29662
Alphaproteobacteria
GCT
Ser
>WENV183738930
PJUE01000472
13311
Alphaproteobacteria
GCT
Ser
>WENV183738466
PJUE01000003
25643
Alphaproteobacteria
GGA
Ser
>WENV183738675
PJUE01000086
424450
Alphaproteobacteria
GGT
Thr
>WENV183739136
PJUE01002117
404592
Alphaproteobacteria
GGT
Thr
>WENV183738560
PJUE01000023
106524
Alphaproteobacteria
GTA
Tyr
>WENV183739616
PJUE01042489
100353
Alphaproteobacteria
GTA
Tyr
>WENV183739403
PJUE01014199
184444
Alphaproteobacteria
GTG
His
>WENV183738497
PJUE01000006
399340
Alphaproteobacteria
GTT
Asn
>WENV183738652
PJUE01000060
399340
Alphaproteobacteria
GTT
Asn
>WENV183739040
PJUE01001120
399340
Alphaproteobacteria
GTT
Asn
>WENV183739542
PJUE01029609
399340
Alphaproteobacteria
GTT
Asn
>WENV183739008
PJUE01000885
400186
Alphaproteobacteria
GTT
Asn
>WENV183739434
PJUE01016907
354296
Alphaproteobacteria
TAC
Val
>WENV183739516
PJUE01026911
354296
Alphaproteobacteria
TAC
Val
>WENV183738842
PJUE01000287
209657
Alphaproteobacteria
TAC
Val
>WENV183739417
PJUE01014806
117819
Alphaproteobacteria
TAG
Leu
>WENV183739107
PJUE01001726
482902
Alphaproteobacteria
TCC
Gly
>WENV183739272
PJUE01005667
179858
Alphaproteobacteria
TCT
Arg
>WENV183739212
PJUE01003255
29655
Alphaproteobacteria
TGA
Ser
>WENV183739505
PJUE01024927
176225
Alphaproteobacteria
TGG
Pro
>WENV183738570
PJUE01000024
199536
Alphaproteobacteria
TGG
Pro
>WENV183738467
PJUE01000003
337513
Alphaproteobacteria
TGT
Thr
>WENV183739131
PJUE01002076
337513
Alphaproteobacteria
TGT
Thr
>WENV183739407
PJUE01014379
401056
Alphaproteobacteria
TTC
Glu
>WENV183738761
PJUE01000176
403581
Alphaproteobacteria
TTG
Gln
>WENV183738912
PJUE01000429
480946
Alphaproteobacteria
TTG
Gln
>WENV183738793
PJUE01000200
178198
Alphaproteobacteria
TTT
Lys
>WENV183738588
PJUE01000031
281409
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK