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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183743361
PJUJ01000669
430786
Alphaproteobacteria
TGT
Thr
>WENV183743629
PJUJ01012664
285028
Alphaproteobacteria
CTT
Lys
>WENV183743235
PJUJ01000196
400214
Alphaproteobacteria
>WENV183743590
PJUJ01008258
304844
Alphaproteobacteria
TAC
Val
>WENV183743662
PJUJ01015983
400945
Alphaproteobacteria
GCC
Gly
>WENV183743667
PJUJ01017175
282749
Alphaproteobacteria
CGC
Ala
>WENV183743665
PJUJ01017163
400250
Alphaproteobacteria
GAC
Val
>WENV183743337
PJUJ01000540
398986
Alphaproteobacteria
TAC
Val
>WENV183743388
PJUJ01000804
398986
Alphaproteobacteria
TAC
Val
>WENV183743666
PJUJ01017163
404182
Alphaproteobacteria
CAC
Val
>WENV183743130
PJUJ01000047
178423
Alphaproteobacteria
TCT
Arg
>WENV183743239
PJUJ01000199
178423
Alphaproteobacteria
TCT
Arg
>WENV183743493
PJUJ01002283
118550
Alphaproteobacteria
GAG
Leu
>WENV183743664
PJUJ01017091
118550
Alphaproteobacteria
GAG
Leu
>WENV183743669
PJUJ01017540
118550
Alphaproteobacteria
GAG
Leu
>WENV183743730
PJUJ01032885
118550
Alphaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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