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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183745315
PJUL01023289
194696
Alphaproteobacteria
TCG
Arg
>WENV183745010
PJUL01001307
430786
Alphaproteobacteria
TGT
Thr
>WENV183745193
PJUL01005116
121655
Alphaproteobacteria
TAG
Leu
>WENV183745096
PJUL01002251
208947
Alphaproteobacteria
CAT
Met
>WENV183745292
PJUL01016746
183848
Alphaproteobacteria
CGG
Pro
>WENV183745213
PJUL01006269
185194
Alphaproteobacteria
TCT
Arg
>WENV183745040
PJUL01001545
293747
Alphaproteobacteria
CTT
Lys
>WENV183745291
PJUL01016613
401056
Alphaproteobacteria
TTC
Glu
>WENV183745350
PJUL01033154
401056
Alphaproteobacteria
TTC
Glu
>WENV183745156
PJUL01003427
402731
Alphaproteobacteria
TTG
Gln
>WENV183745119
PJUL01002596
188085
Alphaproteobacteria
GTC
Asp
>WENV183745124
PJUL01002718
188085
Alphaproteobacteria
GTC
Asp
>WENV183745231
PJUL01007814
315952
Alphaproteobacteria
GAA
Phe
>WENV183745152
PJUL01003379
400258
Alphaproteobacteria
>WENV183745204
PJUL01005787
282966
Alphaproteobacteria
TTT
Lys
>WENV183745351
PJUL01033241
282966
Alphaproteobacteria
TTT
Lys
>WENV183745281
PJUL01015024
176230
Alphaproteobacteria
CGG
Pro
>WENV183744922
PJUL01000694
284697
Alphaproteobacteria
GAA
Phe
>WENV183744908
PJUL01000600
191064
Alphaproteobacteria
CCG
Arg
>WENV183745295
PJUL01017652
195445
Alphaproteobacteria
CAT
Met
>WENV183745044
PJUL01001590
285028
Alphaproteobacteria
CTT
Lys
>WENV183745118
PJUL01002581
285028
Alphaproteobacteria
CTT
Lys
>WENV183745141
PJUL01003031
400223
Alphaproteobacteria
GGT
Thr
>WENV183744774
PJUL01000209
282748
Alphaproteobacteria
CGT
Thr
>WENV183744809
PJUL01000278
400214
Alphaproteobacteria
>WENV183745237
PJUL01008177
304844
Alphaproteobacteria
TAC
Val
>WENV183745337
PJUL01027523
157150
Alphaproteobacteria
GGG
Pro
>WENV183745201
PJUL01005656
118100
Alphaproteobacteria
GTA
Tyr
>WENV183744933
PJUL01000752
400945
Alphaproteobacteria
GCC
Gly
>WENV183745084
PJUL01002093
400945
Alphaproteobacteria
GCC
Gly
>WENV183745361
PJUL01037140
400249
Alphaproteobacteria
GCC
Gly
>WENV183745085
PJUL01002116
401165
Alphaproteobacteria
CAC
Val
>WENV183745191
PJUL01004965
289463
Alphaproteobacteria
CAT
Met
>WENV183745111
PJUL01002467
399879
Alphaproteobacteria
GTT
Asn
>WENV183745358
PJUL01035537
29653
Alphaproteobacteria
TGA
Ser
>WENV183745083
PJUL01002078
178246
Alphaproteobacteria
TCT
Arg
>WENV183744937
PJUL01000763
282749
Alphaproteobacteria
CGC
Ala
>WENV183745167
PJUL01003937
282749
Alphaproteobacteria
CGC
Ala
>WENV183745031
PJUL01001437
404744
Alphaproteobacteria
GCC
Gly
>WENV183745182
PJUL01004562
404744
Alphaproteobacteria
GCC
Gly
>WENV183745321
PJUL01024141
29417
Alphaproteobacteria
CGA
Ser
>WENV183745233
PJUL01007973
178252
Alphaproteobacteria
TGG
Pro
>WENV183745159
PJUL01003547
415537
Alphaproteobacteria
>WENV183744958
PJUL01000926
398986
Alphaproteobacteria
TAC
Val
>WENV183745022
PJUL01001390
398986
Alphaproteobacteria
TAC
Val
>WENV183745163
PJUL01003764
29652
Alphaproteobacteria
CGA
Ser
>WENV183744682
PJUL01000063
178423
Alphaproteobacteria
TCT
Arg
>WENV183744817
PJUL01000287
178423
Alphaproteobacteria
TCT
Arg
>WENV183745247
PJUL01008645
35980
Alphaproteobacteria
CGA
Ser
>WENV183745112
PJUL01002489
118550
Alphaproteobacteria
GAG
Leu
>WENV183744806
PJUL01000274
308123
Alphaproteobacteria
CCA
Trp
>WENV183745123
PJUL01002679
308123
Alphaproteobacteria
CCA
Trp
>WENV183745208
PJUL01006010
180027
Alphaproteobacteria
CAT
Met
>WENV183745234
PJUL01007980
480958
Alphaproteobacteria
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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