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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183793329
PVBE010004683
140876
Alphaproteobacteria
>WENV183793366
PVBE010006918
176153
Alphaproteobacteria
CAT
Met
>WENV183793443
PVBE010013311
399408
Alphaproteobacteria
TGT
Thr
>WENV183793522
PVBE010021308
398994
Alphaproteobacteria
GTT
Asn
>WENV183793809
PVBE010044102
102146
Alphaproteobacteria
GTA
Tyr
>WENV183794346
PVBE010088361
73167
Alphaproteobacteria
GAG
Leu
>WENV183794396
PVBE010094058
404182
Alphaproteobacteria
CAC
Val
>WENV183794505
PVBE010103362
283320
Alphaproteobacteria
>WENV183795119
PVBE010147902
419842
Alphaproteobacteria
GCC
Gly
>WENV183795965
PVBE010213960
73986
Alphaproteobacteria
CAG
Leu
>WENV183796454
PVBE010250643
201940
Alphaproteobacteria
CAT
Met
>WENV183796470
PVBE010251958
287529
Alphaproteobacteria
TAC
Val
>WENV183797082
PVBE010301543
178736
Alphaproteobacteria
CCT
Arg
>WENV183797091
PVBE010302211
73986
Alphaproteobacteria
CAG
Leu
>WENV183797637
PVBE010351439
197241
Alphaproteobacteria
GGG
Pro
>WENV183797960
PVBE010378010
208947
Alphaproteobacteria
CAT
Met
>WENV183798190
PVBE010397846
400515
Alphaproteobacteria
GAC
Val
>WENV183798589
PVBE010430630
73986
Alphaproteobacteria
CAG
Leu
>WENV183798606
PVBE010432331
178503
Alphaproteobacteria
GGG
Pro
>WENV183799042
PVBE010471120
313857
Alphaproteobacteria
TGC
Ala
>WENV183799768
PVBE010536307
73986
Alphaproteobacteria
CAG
Leu
>WENV183800246
PVBE010573643
201940
Alphaproteobacteria
CAT
Met
>WENV183800862
PVBE010624106
289412
Alphaproteobacteria
CCA
Trp
>WENV183801299
PVBE010664529
201940
Alphaproteobacteria
CAT
Met
>WENV183801400
PVBE010672417
291892
Alphaproteobacteria
TAC
Val
>WENV183801975
PVBE010722426
419842
Alphaproteobacteria
GCC
Gly
>WENV183802019
PVBE010726398
73490
Alphaproteobacteria
GAG
Leu
>WENV183802489
PVBE010763041
481268
Alphaproteobacteria
TCC
Gly
>WENV183803825
PVBE010878264
282981
Alphaproteobacteria
CCA
Trp
>WENV183804246
PVBE010911974
210530
Alphaproteobacteria
CGG
Pro
>WENV183804260
PVBE010913437
313857
Alphaproteobacteria
TGC
Ala
>WENV183804860
PVBE010966126
400516
Alphaproteobacteria
TTG
Gln
>WENV183804989
PVBE010978163
190614
Alphaproteobacteria
TGG
Pro
>WENV183805455
PVBE011021284
29841
Alphaproteobacteria
GGA
Ser
>WENV183805657
PVBE011041171
400517
Alphaproteobacteria
GGT
Thr
>WENV183805813
PVBE011055567
176225
Alphaproteobacteria
TGG
Pro
>WENV183806177
PVBE011091716
178510
Alphaproteobacteria
ACG
Arg
>WENV183806701
PVBE011139619
419842
Alphaproteobacteria
GCC
Gly
>WENV183806975
PVBE011162046
481326
Alphaproteobacteria
GCA
Cys
>WENV183807280
PVBE011185968
398996
Alphaproteobacteria
GCC
Gly
>WENV183807315
PVBE011190124
493260
Alphaproteobacteria
GCA
Cys
>WENV183807489
PVBE011203811
405688
Alphaproteobacteria
GTT
Asn
>WENV183807627
PVBE011215911
419842
Alphaproteobacteria
GCC
Gly
>WENV183807628
PVBE011215911
73986
Alphaproteobacteria
CAG
Leu
>WENV183807834
PVBE011237903
480900
Alphaproteobacteria
GCA
Cys
>WENV183808044
PVBE011257446
281650
Alphaproteobacteria
CCA
Trp
>WENV183808127
PVBE011265094
419842
Alphaproteobacteria
GCC
Gly
>WENV183808597
PVBE011310592
73490
Alphaproteobacteria
GAG
Leu
>WENV183808657
PVBE011316833
308123
Alphaproteobacteria
CCA
Trp
>WENV183808723
PVBE011321711
29729
Alphaproteobacteria
GCT
Ser
>WENV183809082
PVBE011354303
13340
Alphaproteobacteria
GCT
Ser
>WENV183809434
PVBE011387562
282977
Alphaproteobacteria
CAT
Met
>WENV183809657
PVBE011407190
296763
Alphaproteobacteria
CCA
Trp
>WENV183810230
PVBE011460951
481099
Alphaproteobacteria
TCC
Gly
>WENV183810362
PVBE011476973
283510
Alphaproteobacteria
TTT
Lys
>WENV183810363
PVBE011476973
100184
Alphaproteobacteria
CAG
Leu
>WENV183810494
PVBE011488693
102146
Alphaproteobacteria
GTA
Tyr
>WENV183810559
PVBE011495137
210530
Alphaproteobacteria
CGG
Pro
>WENV183810614
PVBE011500176
481098
Alphaproteobacteria
CTG
Gln
>WENV183810769
PVBE011513319
404712
Alphaproteobacteria
CCC
Gly
>WENV183810975
PVBE011534015
284624
Alphaproteobacteria
TGC
Ala
>WENV183811499
PVBE011587962
73986
Alphaproteobacteria
CAG
Leu
>WENV183811774
PVBE011613787
195438
Alphaproteobacteria
GAT
Ile
>WENV183811806
PVBE011616715
216373
Alphaproteobacteria
TGG
Pro
>WENV183811835
PVBE011620354
281676
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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