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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170106043
CEBV01032617
405363
Bacillota
GCA
Cys
>WENV170105473
CEBV01011239
280428
Bacillota
GAA
Phe
>WENV170105911
CEBV01026683
280428
Bacillota
GAA
Phe
>WENV170106413
CEBV01048038
280466
Bacillota
TAC
Val
>WENV170105365
CEBV01006567
175842
Bacillota
CAC
Val
>WENV170105601
CEBV01015623
175842
Bacillota
CAC
Val
>WENV170106003
CEBV01031099
175842
Bacillota
CAC
Val
>WENV170105683
CEBV01018893
179563
Bacillota
GAT
Ile
>WENV170106311
CEBV01043942
179563
Bacillota
GAT
Ile
>WENV170106310
CEBV01043942
295166
Bacillota
TGC
Ala
>WENV170105403
CEBV01008576
190476
Bacillota
CAT
Met
>WENV170105339
CEBV01004657
280447
Bacillota
GAC
Val
>WENV170105352
CEBV01005447
280447
Bacillota
GAC
Val
>WENV170105922
CEBV01027404
280447
Bacillota
GAC
Val
>WENV170105761
CEBV01021217
5692
Bacillota
GCT
Ser
>WENV170105937
CEBV01027874
5692
Bacillota
GCT
Ser
>WENV170106143
CEBV01037087
5692
Bacillota
GCT
Ser
>WENV170105376
CEBV01007358
73009
Bacillota
CAG
Leu
>WENV170105724
CEBV01020041
73009
Bacillota
CAG
Leu
>WENV170106179
CEBV01038383
73009
Bacillota
CAG
Leu
>WENV170105777
CEBV01022010
291581
Bacillota
CGG
Pro
>WENV170105910
CEBV01026678
175859
Bacillota
TCT
Arg
>WENV170106365
CEBV01045941
175859
Bacillota
TCT
Arg
>WENV170105971
CEBV01029270
175831
Bacillota
ACG
Arg
>WENV170106297
CEBV01043187
175831
Bacillota
ACG
Arg
>WENV170106327
CEBV01044755
175831
Bacillota
ACG
Arg
>WENV170105689
CEBV01019274
480322
Bacillota
CTG
Gln
>WENV170105776
CEBV01022010
480322
Bacillota
CTG
Gln
>WENV170106430
CEBV01048851
480322
Bacillota
CTG
Gln
>WENV170105613
CEBV01016172
175868
Bacillota
GTT
Asn
>WENV170105976
CEBV01029473
175868
Bacillota
GTT
Asn
>WENV170106152
CEBV01037434
175868
Bacillota
GTT
Asn
>WENV170106329
CEBV01044769
175868
Bacillota
GTT
Asn
>WENV170106151
CEBV01037434
398854
Bacillota
CTC
Glu
>WENV170106328
CEBV01044769
398854
Bacillota
CTC
Glu
>WENV170105437
CEBV01009946
291576
Bacillota
CCC
Gly
>WENV170105935
CEBV01027873
291576
Bacillota
CCC
Gly
>WENV170105311
CEBV01003133
480324
Bacillota
TTG
Gln
>WENV170106403
CEBV01047960
480324
Bacillota
TTG
Gln
>WENV170106469
CEBV01050860
480324
Bacillota
TTG
Gln
>WENV170105379
CEBV01007435
186051
Bacillota
GAT
Ile
>WENV170106444
CEBV01050050
186051
Bacillota
GAT
Ile
>WENV170105371
CEBV01006715
280444
Bacillota
GGT
Thr
>WENV170105668
CEBV01018245
280444
Bacillota
GGT
Thr
>WENV170105898
CEBV01026308
179755
Bacillota
CCG
Arg
>WENV170106009
CEBV01031203
179755
Bacillota
CCG
Arg
>WENV170106442
CEBV01049721
179755
Bacillota
CCG
Arg
>WENV170105271
CEBV01001035
398832
Bacillota
TTC
Glu
>WENV170105404
CEBV01008576
398832
Bacillota
TTC
Glu
>WENV170105827
CEBV01023119
398832
Bacillota
TTC
Glu
>WENV170106470
CEBV01050877
398833
Bacillota
TGT
Thr
>WENV170105936
CEBV01027874
56074
Bacillota
TGA
Ser
>WENV170106184
CEBV01038389
280473
Bacillota
TGG
Pro
>WENV170105581
CEBV01015231
280473
Bacillota
TGG
Pro
>WENV170105821
CEBV01022812
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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