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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180001517
FLNX01002218
289121
Bacillota
CCA
Trp
>WENV180001526
FLNX01002237
338033
Bacillota
GAA
Phe
>WENV180001527
FLNX01002243
482078
Bacillota
CCC
Gly
>WENV180001539
FLNX01002325
403759
Bacillota
CTC
Glu
>WENV180001541
FLNX01002326
338033
Bacillota
GAA
Phe
>WENV180002039
FLNX01004549
156730
Bacillota
ACG
Arg
>WENV180002049
FLNX01004559
187458
Bacillota
CAT
Met
>WENV180002056
FLNX01004581
287380
Bacillota
CTT
Lys
>WENV180002059
FLNX01004589
287508
Bacillota
GTG
His
>WENV180002062
FLNX01004591
179935
Bacillota
GTC
Asp
>WENV180002067
FLNX01004597
401111
Bacillota
TTC
Glu
>WENV180002068
FLNX01004597
359682
Bacillota
TAC
Val
>WENV180002069
FLNX01004598
356355
Bacillota
CAT
Met
>WENV180002076
FLNX01004665
156730
Bacillota
ACG
Arg
>WENV180002077
FLNX01004683
179935
Bacillota
GTC
Asp
>WENV180002079
FLNX01004828
359682
Bacillota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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