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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180004364
FLRS01000598
20942
Bacillota
GGA
Ser
>WENV180004471
FLRS01007766
489283
Bacillota
GCA
Cys
>WENV180004495
FLRS01012180
404126
Bacillota
GCC
Gly
>WENV180004496
FLRS01012180
289147
Bacillota
GTT
Asn
>WENV180004511
FLRS01015343
482593
Bacillota
CCC
Gly
>WENV180004512
FLRS01015376
141202
Bacillota
CAA
Leu
>WENV180004532
FLRS01017759
280547
Bacillota
GTC
Asp
>WENV180004537
FLRS01019522
289715
Bacillota
TAC
Val
>WENV180004562
FLRS01024050
287643
Bacillota
TAC
Val
>WENV180004574
FLRS01027511
403766
Bacillota
TTG
Gln
>WENV180004590
FLRS01031546
119459
Bacillota
TAG
Leu
>WENV180004593
FLRS01032143
48505
Bacillota
TGA
Ser
>WENV180004596
FLRS01032870
289717
Bacillota
CTT
Lys
>WENV180004609
FLRS01041198
293309
Bacillota
GTT
Asn
>WENV180004618
FLRS01044759
29930
Bacillota
GGA
Ser
>WENV180004627
FLRS01048881
48505
Bacillota
TGA
Ser
>WENV180004636
FLRS01052374
487804
Bacillota
GGT
Thr
>WENV180004640
FLRS01055089
289716
Bacillota
GTG
His
>WENV180004641
FLRS01055089
404091
Bacillota
TTG
Gln
>WENV180004644
FLRS01056729
323864
Bacillota
TGC
Ala
>WENV180004650
FLRS01061759
48505
Bacillota
TGA
Ser
>WENV180004664
FLRS01075071
141202
Bacillota
CAA
Leu
>WENV180004668
FLRS01077053
47166
Bacillota
CGA
Ser
>WENV180004670
FLRS01080143
291629
Bacillota
CCA
Trp
>WENV180004687
FLRS01087736
184495
Bacillota
CAT
Met
>WENV180004702
FLRS01095291
104114
Bacillota
CAG
Leu
>WENV180004706
FLRS01098122
20943
Bacillota
CGA
Ser
>WENV180004721
FLRS01106896
184537
Bacillota
ACG
Arg
>WENV180004723
FLRS01109217
482593
Bacillota
CCC
Gly
>WENV180004729
FLRS01117866
183995
Bacillota
GGG
Pro
>WENV180004735
FLRS01120459
289149
Bacillota
GGT
Thr
>WENV180004736
FLRS01120459
183993
Bacillota
CAT
Met
>WENV180004738
FLRS01124853
184537
Bacillota
ACG
Arg
>WENV180004745
FLRS01129673
141202
Bacillota
CAA
Leu
>WENV180004768
FLRS01147723
289147
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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