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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180005190
FLRW01000098
184537
Bacillota
ACG
Arg
>WENV180005191
FLRW01000098
119459
Bacillota
TAG
Leu
>WENV180005200
FLRW01000332
482593
Bacillota
CCC
Gly
>WENV180005203
FLRW01000357
289717
Bacillota
CTT
Lys
>WENV180005207
FLRW01000493
289716
Bacillota
GTG
His
>WENV180005220
FLRW01000774
48505
Bacillota
TGA
Ser
>WENV180005319
FLRW01003223
184539
Bacillota
TCT
Arg
>WENV180005336
FLRW01004697
445407
Bacillota
GCC
Gly
>WENV180005337
FLRW01004697
408526
Bacillota
GCA
Cys
>WENV180005401
FLRW01019305
289713
Bacillota
TGT
Thr
>WENV180005404
FLRW01019305
296855
Bacillota
GGT
Thr
>WENV180005405
FLRW01019305
184495
Bacillota
CAT
Met
>WENV180005416
FLRW01024006
482593
Bacillota
CCC
Gly
>WENV180005427
FLRW01028057
20932
Bacillota
GCT
Ser
>WENV180005449
FLRW01041527
289713
Bacillota
TGT
Thr
>WENV180005452
FLRW01041527
296855
Bacillota
GGT
Thr
>WENV180005453
FLRW01041527
184495
Bacillota
CAT
Met
>WENV180005471
FLRW01053403
444984
Bacillota
GCC
Gly
>WENV180005482
FLRW01060415
119459
Bacillota
TAG
Leu
>WENV180005506
FLRW01076042
20942
Bacillota
GGA
Ser
>WENV180005510
FLRW01079026
289716
Bacillota
GTG
His
>WENV180005511
FLRW01079026
404091
Bacillota
TTG
Gln
>WENV180005512
FLRW01079026
289761
Bacillota
TTT
Lys
>WENV180005516
FLRW01081015
301649
Bacillota
TTT
Lys
>WENV180005518
FLRW01081015
455891
Bacillota
GCC
Gly
>WENV180005520
FLRW01081015
212982
Bacillota
ACG
Arg
>WENV180005527
FLRW01081015
283303
Bacillota
GTC
Asp
>WENV180005536
FLRW01087226
445407
Bacillota
GCC
Gly
>WENV180005537
FLRW01087226
333281
Bacillota
GTT
Asn
>WENV180005558
FLRW01097056
289716
Bacillota
GTG
His
>WENV180005559
FLRW01097056
404091
Bacillota
TTG
Gln
>WENV180005560
FLRW01097056
289761
Bacillota
TTT
Lys
>WENV180005580
FLRW01112640
20942
Bacillota
GGA
Ser
>WENV180005600
FLRW01127387
283622
Bacillota
CTT
Lys
>WENV180005620
FLRW01147919
444984
Bacillota
GCC
Gly
>WENV180005622
FLRW01148488
235661
Bacillota
GTC
Asp
>WENV180005728
FLRW01275678
332181
Bacillota
TGT
Thr
>WENV180005754
FLRW01317633
482593
Bacillota
CCC
Gly
>WENV180005765
FLRW01321937
432453
Bacillota
TTC
Glu
>WENV180005766
FLRW01321937
289715
Bacillota
TAC
Val
>WENV180005767
FLRW01322208
20943
Bacillota
CGA
Ser
>WENV180005774
FLRW01323224
141202
Bacillota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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