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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180006076
FLRX01132029
283303
Bacillota
GTC
Asp
>WENV180006061
FLRX01122053
212982
Bacillota
ACG
Arg
>WENV180006041
FLRX01104421
408526
Bacillota
GCA
Cys
>WENV180006151
FLRX01212236
296855
Bacillota
GGT
Thr
>WENV180005823
FLRX01002116
48505
Bacillota
TGA
Ser
>WENV180005942
FLRX01042227
48505
Bacillota
TGA
Ser
>WENV180005865
FLRX01013633
183994
Bacillota
TCT
Arg
>WENV180005992
FLRX01079988
231532
Bacillota
ACG
Arg
>WENV180005991
FLRX01079988
291629
Bacillota
CCA
Trp
>WENV180006039
FLRX01104328
405874
Bacillota
TTC
Glu
>WENV180005892
FLRX01022223
291553
Bacillota
GAA
Phe
>WENV180005961
FLRX01059114
482593
Bacillota
CCC
Gly
>WENV180006109
FLRX01164546
482593
Bacillota
CCC
Gly
>WENV180006123
FLRX01180442
482593
Bacillota
CCC
Gly
>WENV180006040
FLRX01104328
287643
Bacillota
TAC
Val
>WENV180006072
FLRX01130338
183993
Bacillota
CAT
Met
>WENV180006071
FLRX01130338
289149
Bacillota
GGT
Thr
>WENV180006152
FLRX01212236
184495
Bacillota
CAT
Met
>WENV180006105
FLRX01156975
141202
Bacillota
CAA
Leu
>WENV180006148
FLRX01212236
332181
Bacillota
TGT
Thr
>WENV180005968
FLRX01064580
47166
Bacillota
CGA
Ser
>WENV180006066
FLRX01123594
404091
Bacillota
TTG
Gln
>WENV180006065
FLRX01123594
289716
Bacillota
GTG
His
>WENV180005986
FLRX01077483
323864
Bacillota
TGC
Ala
>WENV180006057
FLRX01122053
301649
Bacillota
TTT
Lys
>WENV180005959
FLRX01057420
119459
Bacillota
TAG
Leu
>WENV180005997
FLRX01082019
179845
Bacillota
CGG
Pro
>WENV180005891
FLRX01022223
280547
Bacillota
GTC
Asp
>WENV180005784
FLRX01000474
289154
Bacillota
CTT
Lys
>WENV180006067
FLRX01123594
289761
Bacillota
TTT
Lys
>WENV180006114
FLRX01170089
289715
Bacillota
TAC
Val
>WENV180006000
FLRX01082861
403766
Bacillota
TTG
Gln
>WENV180006168
FLRX01227359
178610
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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