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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180007368
FLSA01006067
482593
Bacillota
CCC
Gly
>WENV180007408
FLSA01014938
141202
Bacillota
CAA
Leu
>WENV180007423
FLSA01019706
280547
Bacillota
GTC
Asp
>WENV180007535
FLSA01065318
486242
Bacillota
TCC
Gly
>WENV180007553
FLSA01076522
291553
Bacillota
GAA
Phe
>WENV180007555
FLSA01076522
408526
Bacillota
GCA
Cys
>WENV180007566
FLSA01080424
289761
Bacillota
TTT
Lys
>WENV180007571
FLSA01083322
289715
Bacillota
TAC
Val
>WENV180007593
FLSA01099362
20942
Bacillota
GGA
Ser
>WENV180007594
FLSA01102602
183957
Bacillota
CCT
Arg
>WENV180007686
FLSA01183891
487804
Bacillota
GGT
Thr
>WENV180007693
FLSA01189769
184537
Bacillota
ACG
Arg
>WENV180007727
FLSA01231541
29930
Bacillota
GGA
Ser
>WENV180007735
FLSA01240814
184537
Bacillota
ACG
Arg
>WENV180007766
FLSA01275608
296855
Bacillota
GGT
Thr
>WENV180007767
FLSA01275608
184495
Bacillota
CAT
Met
>WENV180007769
FLSA01277204
200563
Bacillota
TGG
Pro
>WENV180007776
FLSA01283408
20943
Bacillota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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