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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180010869
FLSI01000052
184537
Bacillota
ACG
Arg
>WENV180010870
FLSI01000052
184537
Bacillota
ACG
Arg
>WENV180011176
FLSI01250684
156730
Bacillota
ACG
Arg
>WENV180011099
FLSI01156336
104114
Bacillota
CAG
Leu
>WENV180011048
FLSI01109198
184495
Bacillota
CAT
Met
>WENV180011170
FLSI01247392
184495
Bacillota
CAT
Met
>WENV180010877
FLSI01000198
482593
Bacillota
CCC
Gly
>WENV180010894
FLSI01003443
47166
Bacillota
CGA
Ser
>WENV180011109
FLSI01164411
179845
Bacillota
CGG
Pro
>WENV180010880
FLSI01000317
283622
Bacillota
CTT
Lys
>WENV180011006
FLSI01074548
183995
Bacillota
GGG
Pro
>WENV180011047
FLSI01109198
296855
Bacillota
GGT
Thr
>WENV180011025
FLSI01089493
283303
Bacillota
GTC
Asp
>WENV180010881
FLSI01000325
289716
Bacillota
GTG
His
>WENV180010973
FLSI01045999
293309
Bacillota
GTT
Asn
>WENV180011013
FLSI01080094
119459
Bacillota
TAG
Leu
>WENV180011044
FLSI01109198
332181
Bacillota
TGT
Thr
>WENV180011063
FLSI01116499
289713
Bacillota
TGT
Thr
>WENV180010974
FLSI01045999
432453
Bacillota
TTC
Glu
>WENV180010882
FLSI01000325
404091
Bacillota
TTG
Gln
>WENV180011064
FLSI01117103
403766
Bacillota
TTG
Gln
>WENV180010883
FLSI01000325
289761
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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