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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180011726
FLSK01028760
184537
Bacillota
ACG
Arg
>WENV180011768
FLSK01041779
184537
Bacillota
ACG
Arg
>WENV180011657
FLSK01015353
141202
Bacillota
CAA
Leu
>WENV180012277
FLSK01321886
141202
Bacillota
CAA
Leu
>WENV180012378
FLSK01376819
141202
Bacillota
CAA
Leu
>WENV180012086
FLSK01166942
184495
Bacillota
CAT
Met
>WENV180012078
FLSK01164271
280644
Bacillota
CCA
Trp
>WENV180011277
FLSK01000905
482593
Bacillota
CCC
Gly
>WENV180011278
FLSK01000905
482593
Bacillota
CCC
Gly
>WENV180011842
FLSK01060272
482593
Bacillota
CCC
Gly
>WENV180011249
FLSK01000342
20943
Bacillota
CGA
Ser
>WENV180011630
FLSK01010399
20943
Bacillota
CGA
Ser
>WENV180011342
FLSK01001550
289717
Bacillota
CTT
Lys
>WENV180011533
FLSK01003556
289717
Bacillota
CTT
Lys
>WENV180012275
FLSK01321202
289717
Bacillota
CTT
Lys
>WENV180012366
FLSK01376754
289717
Bacillota
CTT
Lys
>WENV180012325
FLSK01371277
283622
Bacillota
CTT
Lys
>WENV180011228
FLSK01000091
291553
Bacillota
GAA
Phe
>WENV180011991
FLSK01121828
291553
Bacillota
GAA
Phe
>WENV180012363
FLSK01376731
291553
Bacillota
GAA
Phe
>WENV180011649
FLSK01013949
408526
Bacillota
GCA
Cys
>WENV180011993
FLSK01121828
408526
Bacillota
GCA
Cys
>WENV180011648
FLSK01013949
445407
Bacillota
GCC
Gly
>WENV180011937
FLSK01100721
445407
Bacillota
GCC
Gly
>WENV180011992
FLSK01121828
445407
Bacillota
GCC
Gly
>WENV180012272
FLSK01319975
444984
Bacillota
GCC
Gly
>WENV180011250
FLSK01000349
20932
Bacillota
GCT
Ser
>WENV180011844
FLSK01060713
20932
Bacillota
GCT
Ser
>WENV180012343
FLSK01376483
20932
Bacillota
GCT
Ser
>WENV180011361
FLSK01002166
20942
Bacillota
GGA
Ser
>WENV180011779
FLSK01042966
20942
Bacillota
GGA
Ser
>WENV180012251
FLSK01296341
183995
Bacillota
GGG
Pro
>WENV180012085
FLSK01166942
296855
Bacillota
GGT
Thr
>WENV180012157
FLSK01219347
510876
Bacillota
GGT
Thr
>WENV180011879
FLSK01076321
141141
Bacillota
GTA
Tyr
>WENV180011981
FLSK01119830
141141
Bacillota
GTA
Tyr
>WENV180011876
FLSK01076321
283303
Bacillota
GTC
Asp
>WENV180011978
FLSK01119830
283303
Bacillota
GTC
Asp
>WENV180011227
FLSK01000091
280547
Bacillota
GTC
Asp
>WENV180011652
FLSK01014426
280547
Bacillota
GTC
Asp
>WENV180011673
FLSK01018235
280547
Bacillota
GTC
Asp
>WENV180011969
FLSK01118010
280547
Bacillota
GTC
Asp
>WENV180011990
FLSK01121828
280547
Bacillota
GTC
Asp
>WENV180012362
FLSK01376731
280547
Bacillota
GTC
Asp
>WENV180011907
FLSK01087902
289716
Bacillota
GTG
His
>WENV180011888
FLSK01081001
453914
Bacillota
GTT
Asn
>WENV180011235
FLSK01000156
289715
Bacillota
TAC
Val
>WENV180011313
FLSK01001344
289715
Bacillota
TAC
Val
>WENV180011883
FLSK01077650
289715
Bacillota
TAC
Val
>WENV180011268
FLSK01000567
119459
Bacillota
TAG
Leu
>WENV180011355
FLSK01001999
119459
Bacillota
TAG
Leu
>WENV180011356
FLSK01001999
119459
Bacillota
TAG
Leu
>WENV180011554
FLSK01004333
119459
Bacillota
TAG
Leu
>WENV180011923
FLSK01094423
480337
Bacillota
TCC
Gly
>WENV180011515
FLSK01003294
184539
Bacillota
TCT
Arg
>WENV180011559
FLSK01004536
184539
Bacillota
TCT
Arg
>WENV180011566
FLSK01005232
184539
Bacillota
TCT
Arg
>WENV180011592
FLSK01006462
184539
Bacillota
TCT
Arg
>WENV180011924
FLSK01094423
184539
Bacillota
TCT
Arg
>WENV180011244
FLSK01000241
48505
Bacillota
TGA
Ser
>WENV180011296
FLSK01001162
48505
Bacillota
TGA
Ser
>WENV180012159
FLSK01221221
48505
Bacillota
TGA
Ser
>WENV180011922
FLSK01094423
208539
Bacillota
TGG
Pro
>WENV180012028
FLSK01136557
332181
Bacillota
TGT
Thr
>WENV180012082
FLSK01166942
289713
Bacillota
TGT
Thr
>WENV180011908
FLSK01087902
404091
Bacillota
TTG
Gln
>WENV180011909
FLSK01087902
289761
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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