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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181754265
OGQR01009372
56079
Bacillota
AAG
Leu
>WENV181753704
OGQR01001894
179176
Bacillota
ACG
Arg
>WENV181754563
OGQR01027448
175831
Bacillota
ACG
Arg
>WENV181754093
OGQR01006021
175842
Bacillota
CAC
Val
>WENV181753277
OGQR01000144
73664
Bacillota
CAG
Leu
>WENV181753817
OGQR01002648
73009
Bacillota
CAG
Leu
>WENV181753213
OGQR01000038
179917
Bacillota
CAT
Met
>WENV181753574
OGQR01000963
179917
Bacillota
CAT
Met
>WENV181754398
OGQR01013966
176018
Bacillota
CAT
Met
>WENV181754081
OGQR01005757
190476
Bacillota
CAT
Met
>WENV181753274
OGQR01000139
187589
Bacillota
CAT
Met
>WENV181753626
OGQR01001246
497729
Bacillota
CCA
Trp
>WENV181753889
OGQR01003192
291576
Bacillota
CCC
Gly
>WENV181753677
OGQR01001709
179755
Bacillota
CCG
Arg
>WENV181753823
OGQR01002708
179755
Bacillota
CCG
Arg
>WENV181754161
OGQR01006934
291581
Bacillota
CGG
Pro
>WENV181753779
OGQR01002364
398854
Bacillota
CTC
Glu
>WENV181754417
OGQR01015110
407726
Bacillota
CTG
Gln
>WENV181754031
OGQR01005078
480322
Bacillota
CTG
Gln
>WENV181754160
OGQR01006934
480322
Bacillota
CTG
Gln
>WENV181753709
OGQR01001927
280428
Bacillota
GAA
Phe
>WENV181753214
OGQR01000038
302145
Bacillota
GAA
Phe
>WENV181753341
OGQR01000243
284627
Bacillota
GAA
Phe
>WENV181754288
OGQR01010143
291634
Bacillota
GAA
Phe
>WENV181753967
OGQR01004163
280483
Bacillota
GAA
Phe
>WENV181754090
OGQR01005911
280447
Bacillota
GAC
Val
>WENV181754165
OGQR01007036
280447
Bacillota
GAC
Val
>WENV181754299
OGQR01010752
234991
Bacillota
GAT
Ile
>WENV181753768
OGQR01002279
189473
Bacillota
GAT
Ile
>WENV181754778
OGQR01065841
201856
Bacillota
GAT
Ile
>WENV181754556
OGQR01026689
405363
Bacillota
GCA
Cys
>WENV181753270
OGQR01000129
343590
Bacillota
GCC
Gly
>WENV181753204
OGQR01000028
285756
Bacillota
GCC
Gly
>WENV181753968
OGQR01004163
285756
Bacillota
GCC
Gly
>WENV181753832
OGQR01002760
405393
Bacillota
GCC
Gly
>WENV181753902
OGQR01003389
5692
Bacillota
GCT
Ser
>WENV181754208
OGQR01007991
27216
Bacillota
GCT
Ser
>WENV181754335
OGQR01012105
312274
Bacillota
GGC
Ala
>WENV181753449
OGQR01000510
184497
Bacillota
GGG
Pro
>WENV181754382
OGQR01013735
184497
Bacillota
GGG
Pro
>WENV181754063
OGQR01005455
280444
Bacillota
GGT
Thr
>WENV181753733
OGQR01002044
289123
Bacillota
GGT
Thr
>WENV181753771
OGQR01002294
99852
Bacillota
GTA
Tyr
>WENV181753906
OGQR01003441
99852
Bacillota
GTA
Tyr
>WENV181753664
OGQR01001542
117745
Bacillota
GTA
Tyr
>WENV181754104
OGQR01006150
118669
Bacillota
GTA
Tyr
>WENV181754287
OGQR01010143
186123
Bacillota
GTC
Asp
>WENV181754378
OGQR01013670
175899
Bacillota
GTC
Asp
>WENV181753983
OGQR01004426
175911
Bacillota
GTC
Asp
>WENV181754062
OGQR01005455
175849
Bacillota
GTC
Asp
>WENV181753836
OGQR01002774
175857
Bacillota
GTG
His
>WENV181754389
OGQR01013966
280641
Bacillota
GTT
Asn
>WENV181753780
OGQR01002364
175868
Bacillota
GTT
Asn
>WENV181754114
OGQR01006268
46835
Bacillota
TAA
Leu
>WENV181753934
OGQR01003779
290391
Bacillota
TAC
Val
>WENV181753707
OGQR01001927
280427
Bacillota
TAC
Val
>WENV181754404
OGQR01014474
510477
Bacillota
TCC
Gly
>WENV181754392
OGQR01013966
480359
Bacillota
TCC
Gly
>WENV181754393
OGQR01013966
176014
Bacillota
TCT
Arg
>WENV181753875
OGQR01003074
175859
Bacillota
TCT
Arg
>WENV181753774
OGQR01002330
52748
Bacillota
TGA
Ser
>WENV181753901
OGQR01003389
56074
Bacillota
TGA
Ser
>WENV181754709
OGQR01050837
353153
Bacillota
TGC
Ala
>WENV181754373
OGQR01013355
323864
Bacillota
TGC
Ala
>WENV181754300
OGQR01010752
291650
Bacillota
TGC
Ala
>WENV181753756
OGQR01002184
176015
Bacillota
TGG
Pro
>WENV181753497
OGQR01000720
280473
Bacillota
TGG
Pro
>WENV181754390
OGQR01013966
459011
Bacillota
TGT
Thr
>WENV181753730
OGQR01002044
332181
Bacillota
TGT
Thr
>WENV181754036
OGQR01005181
303718
Bacillota
TGT
Thr
>WENV181754038
OGQR01005208
303718
Bacillota
TGT
Thr
>WENV181754375
OGQR01013466
398833
Bacillota
TGT
Thr
>WENV181754141
OGQR01006739
398857
Bacillota
TTC
Glu
>WENV181754082
OGQR01005757
398832
Bacillota
TTC
Glu
>WENV181754394
OGQR01013966
280642
Bacillota
TTG
Gln
>WENV181753837
OGQR01002774
401685
Bacillota
TTG
Gln
>WENV181754802
OGQR01074914
480324
Bacillota
TTG
Gln
>WENV181754395
OGQR01013966
280639
Bacillota
TTT
Lys
>WENV181754273
OGQR01009763
280476
Bacillota
TTT
Lys
>WENV181753576
OGQR01000963
309916
Bacillota
TTT
Lys
>WENV181753838
OGQR01002774
309916
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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