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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
126 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183171325
OLPC01000040
291579
Bacillota
GAA
Phe
>WENV183171326
OLPC01000041
398852
Bacillota
CTC
Glu
>WENV183171408
OLPC01000109
280492
Bacillota
CTT
Lys
>WENV183171416
OLPC01000140
73664
Bacillota
CAG
Leu
>WENV183171432
OLPC01000164
117745
Bacillota
GTA
Tyr
>WENV183171433
OLPC01000164
398852
Bacillota
CTC
Glu
>WENV183171444
OLPC01000175
280462
Bacillota
GAA
Phe
>WENV183171475
OLPC01000201
184497
Bacillota
GGG
Pro
>WENV183171493
OLPC01000224
290391
Bacillota
TAC
Val
>WENV183171495
OLPC01000225
280476
Bacillota
TTT
Lys
>WENV183171499
OLPC01000232
285601
Bacillota
TTC
Glu
>WENV183171509
OLPC01000240
280492
Bacillota
CTT
Lys
>WENV183171519
OLPC01000267
175859
Bacillota
TCT
Arg
>WENV183171529
OLPC01000301
284723
Bacillota
TAC
Val
>WENV183171546
OLPC01000359
73664
Bacillota
CAG
Leu
>WENV183171566
OLPC01000415
401685
Bacillota
TTG
Gln
>WENV183171585
OLPC01000455
294020
Bacillota
TAC
Val
>WENV183171651
OLPC01000595
46835
Bacillota
TAA
Leu
>WENV183171664
OLPC01000622
179176
Bacillota
ACG
Arg
>WENV183171662
OLPC01000622
284723
Bacillota
TAC
Val
>WENV183171658
OLPC01000622
398857
Bacillota
TTC
Glu
>WENV183171661
OLPC01000622
175915
Bacillota
GTC
Asp
>WENV183171683
OLPC01000687
175857
Bacillota
GTG
His
>WENV183171685
OLPC01000687
280463
Bacillota
TTT
Lys
>WENV183171688
OLPC01000690
285756
Bacillota
GCC
Gly
>WENV183171692
OLPC01000696
175831
Bacillota
ACG
Arg
>WENV183171701
OLPC01000742
280492
Bacillota
CTT
Lys
>WENV183171710
OLPC01000774
398852
Bacillota
CTC
Glu
>WENV183171718
OLPC01000806
184497
Bacillota
GGG
Pro
>WENV183171738
OLPC01000855
280447
Bacillota
GAC
Val
>WENV183171741
OLPC01000880
280462
Bacillota
GAA
Phe
>WENV183171770
OLPC01001046
117745
Bacillota
GTA
Tyr
>WENV183171772
OLPC01001046
280462
Bacillota
GAA
Phe
>WENV183171773
OLPC01001046
280463
Bacillota
TTT
Lys
>WENV183171779
OLPC01001074
179755
Bacillota
CCG
Arg
>WENV183171792
OLPC01001151
21311
Bacillota
GCT
Ser
>WENV183171820
OLPC01001295
284627
Bacillota
GAA
Phe
>WENV183171821
OLPC01001295
280463
Bacillota
TTT
Lys
>WENV183171834
OLPC01001383
290391
Bacillota
TAC
Val
>WENV183171844
OLPC01001434
184497
Bacillota
GGG
Pro
>WENV183171855
OLPC01001500
21311
Bacillota
GCT
Ser
>WENV183171862
OLPC01001530
281593
Bacillota
CAT
Met
>WENV183171867
OLPC01001551
58120
Bacillota
AAG
Leu
>WENV183171868
OLPC01001553
285601
Bacillota
TTC
Glu
>WENV183171873
OLPC01001606
175868
Bacillota
GTT
Asn
>WENV183171882
OLPC01001705
480322
Bacillota
CTG
Gln
>WENV183171905
OLPC01001838
401685
Bacillota
TTG
Gln
>WENV183171934
OLPC01002107
480322
Bacillota
CTG
Gln
>WENV183171943
OLPC01002175
5692
Bacillota
GCT
Ser
>WENV183171942
OLPC01002175
56074
Bacillota
TGA
Ser
>WENV183171949
OLPC01002257
58120
Bacillota
AAG
Leu
>WENV183171950
OLPC01002257
58120
Bacillota
AAG
Leu
>WENV183171958
OLPC01002305
398852
Bacillota
CTC
Glu
>WENV183171961
OLPC01002326
398852
Bacillota
CTC
Glu
>WENV183171962
OLPC01002327
291576
Bacillota
CCC
Gly
>WENV183171974
OLPC01002430
179755
Bacillota
CCG
Arg
>WENV183171977
OLPC01002451
280428
Bacillota
GAA
Phe
>WENV183171998
OLPC01002633
284723
Bacillota
TAC
Val
>WENV183172019
OLPC01002880
285556
Bacillota
TGT
Thr
>WENV183172026
OLPC01002908
291579
Bacillota
GAA
Phe
>WENV183172033
OLPC01002963
179176
Bacillota
ACG
Arg
>WENV183172035
OLPC01002968
5692
Bacillota
GCT
Ser
>WENV183172034
OLPC01002968
56074
Bacillota
TGA
Ser
>WENV183172069
OLPC01003193
284723
Bacillota
TAC
Val
>WENV183172073
OLPC01003208
280473
Bacillota
TGG
Pro
>WENV183172078
OLPC01003294
284723
Bacillota
TAC
Val
>WENV183172086
OLPC01003362
280444
Bacillota
GGT
Thr
>WENV183172085
OLPC01003362
175849
Bacillota
GTC
Asp
>WENV183172108
OLPC01003551
480324
Bacillota
TTG
Gln
>WENV183172116
OLPC01003629
398833
Bacillota
TGT
Thr
>WENV183172150
OLPC01004077
58120
Bacillota
AAG
Leu
>WENV183172156
OLPC01004132
175868
Bacillota
GTT
Asn
>WENV183172157
OLPC01004133
280444
Bacillota
GGT
Thr
>WENV183172159
OLPC01004133
280444
Bacillota
GGT
Thr
>WENV183172158
OLPC01004133
175849
Bacillota
GTC
Asp
>WENV183172167
OLPC01004230
175859
Bacillota
TCT
Arg
>WENV183172179
OLPC01004594
481217
Bacillota
GCA
Cys
>WENV183172207
OLPC01005116
179755
Bacillota
CCG
Arg
>WENV183172252
OLPC01005789
291579
Bacillota
GAA
Phe
>WENV183172260
OLPC01005842
175842
Bacillota
CAC
Val
>WENV183172262
OLPC01005870
280473
Bacillota
TGG
Pro
>WENV183172271
OLPC01006156
280447
Bacillota
GAC
Val
>WENV183172298
OLPC01006798
175868
Bacillota
GTT
Asn
>WENV183172297
OLPC01006798
398854
Bacillota
CTC
Glu
>WENV183172301
OLPC01006877
480324
Bacillota
TTG
Gln
>WENV183172321
OLPC01007211
291581
Bacillota
CGG
Pro
>WENV183172320
OLPC01007211
480322
Bacillota
CTG
Gln
>WENV183172371
OLPC01008553
480359
Bacillota
TCC
Gly
>WENV183172370
OLPC01008553
402717
Bacillota
TTC
Glu
>WENV183172374
OLPC01008553
280641
Bacillota
GTT
Asn
>WENV183172397
OLPC01009465
175868
Bacillota
GTT
Asn
>WENV183172396
OLPC01009465
398854
Bacillota
CTC
Glu
>WENV183172434
OLPC01011470
73009
Bacillota
CAG
Leu
>WENV183172484
OLPC01013848
189473
Bacillota
GAT
Ile
>WENV183172496
OLPC01014570
295166
Bacillota
TGC
Ala
>WENV183172500
OLPC01014813
184497
Bacillota
GGG
Pro
>WENV183172503
OLPC01014924
184687
Bacillota
CAT
Met
>WENV183172505
OLPC01014924
184687
Bacillota
CAT
Met
>WENV183172502
OLPC01014924
294020
Bacillota
TAC
Val
>WENV183172504
OLPC01014924
294020
Bacillota
TAC
Val
>WENV183172523
OLPC01017080
480360
Bacillota
GCA
Cys
>WENV183172521
OLPC01017080
176015
Bacillota
TGG
Pro
>WENV183172525
OLPC01017080
280640
Bacillota
TAC
Val
>WENV183172522
OLPC01017080
176019
Bacillota
GTG
His
>WENV183172527
OLPC01017292
287363
Bacillota
CTT
Lys
>WENV183172555
OLPC01020201
480520
Bacillota
TCC
Gly
>WENV183172558
OLPC01020201
281015
Bacillota
GTG
His
>WENV183172560
OLPC01020201
283502
Bacillota
TTT
Lys
>WENV183172556
OLPC01020201
182384
Bacillota
TCT
Arg
>WENV183172591
OLPC01024271
291576
Bacillota
CCC
Gly
>WENV183172595
OLPC01024812
176678
Bacillota
GTC
Asp
>WENV183172593
OLPC01024812
402717
Bacillota
TTC
Glu
>WENV183172601
OLPC01026033
398832
Bacillota
TTC
Glu
>WENV183172612
OLPC01028207
399261
Bacillota
>WENV183172620
OLPC01029792
480360
Bacillota
GCA
Cys
>WENV183172639
OLPC01033750
180107
Bacillota
TCT
Arg
>WENV183172644
OLPC01035793
141454
Bacillota
TAG
Leu
>WENV183172647
OLPC01035793
280642
Bacillota
TTG
Gln
>WENV183172648
OLPC01035793
280639
Bacillota
TTT
Lys
>WENV183172646
OLPC01035793
176014
Bacillota
TCT
Arg
>WENV183172645
OLPC01035793
398916
Bacillota
>WENV183172654
OLPC01037794
282755
Bacillota
GGT
Thr
>WENV183172691
OLPC01050534
99852
Bacillota
GTA
Tyr
>WENV183172694
OLPC01051023
280561
Bacillota
CAT
Met
>WENV183172700
OLPC01053349
405363
Bacillota
GCA
Cys
>WENV183172705
OLPC01054057
119278
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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