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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183422354
OMBE01000087
175831
Bacillota
ACG
Arg
>WENV183422366
OMBE01000250
175842
Bacillota
CAC
Val
>WENV183422379
OMBE01000399
73009
Bacillota
CAG
Leu
>WENV183422537
OMBE01005147
190476
Bacillota
CAT
Met
>WENV183422476
OMBE01002417
291576
Bacillota
CCC
Gly
>WENV183422402
OMBE01000885
179755
Bacillota
CCG
Arg
>WENV183422368
OMBE01000261
291581
Bacillota
CGG
Pro
>WENV183422474
OMBE01002356
398854
Bacillota
CTC
Glu
>WENV183422495
OMBE01003206
398852
Bacillota
CTC
Glu
>WENV183422367
OMBE01000261
480322
Bacillota
CTG
Gln
>WENV183422411
OMBE01001033
280428
Bacillota
GAA
Phe
>WENV183422604
OMBE01010771
284627
Bacillota
GAA
Phe
>WENV183422431
OMBE01001112
291634
Bacillota
GAA
Phe
>WENV183422454
OMBE01001771
280447
Bacillota
GAC
Val
>WENV183422506
OMBE01003623
405363
Bacillota
GCA
Cys
>WENV183422467
OMBE01002225
349107
Bacillota
GCC
Gly
>WENV183422449
OMBE01001596
285756
Bacillota
GCC
Gly
>WENV183422617
OMBE01012670
405393
Bacillota
GCC
Gly
>WENV183422483
OMBE01002675
5692
Bacillota
GCT
Ser
>WENV183422688
OMBE01027264
27216
Bacillota
GCT
Ser
>WENV183422387
OMBE01000533
280444
Bacillota
GGT
Thr
>WENV183422490
OMBE01002998
280444
Bacillota
GGT
Thr
>WENV183422472
OMBE01002316
99852
Bacillota
GTA
Tyr
>WENV183422430
OMBE01001112
186123
Bacillota
GTC
Asp
>WENV183422489
OMBE01002998
175849
Bacillota
GTC
Asp
>WENV183422550
OMBE01005759
229015
Bacillota
GTG
His
>WENV183422446
OMBE01001596
290391
Bacillota
TAC
Val
>WENV183422544
OMBE01005657
175859
Bacillota
TCT
Arg
>WENV183422549
OMBE01005759
179810
Bacillota
TCT
Arg
>WENV183422482
OMBE01002675
56074
Bacillota
TGA
Ser
>WENV183422481
OMBE01002663
280473
Bacillota
TGG
Pro
>WENV183422565
OMBE01006785
303718
Bacillota
TGT
Thr
>WENV183422409
OMBE01001009
398833
Bacillota
TGT
Thr
>WENV183422538
OMBE01005147
398832
Bacillota
TTC
Glu
>WENV183422374
OMBE01000354
480324
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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