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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183430389
OMBQ01000004
332181
Bacillota
TGT
Thr
>WENV183430392
OMBQ01000004
289123
Bacillota
GGT
Thr
>WENV183430403
OMBQ01000009
346451
Bacillota
TTT
Lys
>WENV183430480
OMBQ01000046
118669
Bacillota
GTA
Tyr
>WENV183430507
OMBQ01000060
405393
Bacillota
GCC
Gly
>WENV183430611
OMBQ01000144
284723
Bacillota
TAC
Val
>WENV183430614
OMBQ01000144
179917
Bacillota
CAT
Met
>WENV183430705
OMBQ01000264
291576
Bacillota
CCC
Gly
>WENV183430726
OMBQ01000288
398833
Bacillota
TGT
Thr
>WENV183430738
OMBQ01000304
186123
Bacillota
GTC
Asp
>WENV183430739
OMBQ01000304
405393
Bacillota
GCC
Gly
>WENV183430767
OMBQ01000350
398852
Bacillota
CTC
Glu
>WENV183430773
OMBQ01000358
346451
Bacillota
TTT
Lys
>WENV183430811
OMBQ01000442
312274
Bacillota
GGC
Ala
>WENV183430818
OMBQ01000450
398854
Bacillota
CTC
Glu
>WENV183430819
OMBQ01000450
175868
Bacillota
GTT
Asn
>WENV183430820
OMBQ01000455
480322
Bacillota
CTG
Gln
>WENV183430821
OMBQ01000455
291581
Bacillota
CGG
Pro
>WENV183430831
OMBQ01000470
290391
Bacillota
TAC
Val
>WENV183430832
OMBQ01000470
285756
Bacillota
GCC
Gly
>WENV183430846
OMBQ01000490
480322
Bacillota
CTG
Gln
>WENV183430847
OMBQ01000490
291581
Bacillota
CGG
Pro
>WENV183430874
OMBQ01000539
56074
Bacillota
TGA
Ser
>WENV183430875
OMBQ01000539
5692
Bacillota
GCT
Ser
>WENV183430883
OMBQ01000561
480324
Bacillota
TTG
Gln
>WENV183430894
OMBQ01000606
291576
Bacillota
CCC
Gly
>WENV183430916
OMBQ01000640
186123
Bacillota
GTC
Asp
>WENV183430917
OMBQ01000640
291634
Bacillota
GAA
Phe
>WENV183430918
OMBQ01000643
405363
Bacillota
GCA
Cys
>WENV183430919
OMBQ01000643
480324
Bacillota
TTG
Gln
>WENV183430964
OMBQ01000722
175859
Bacillota
TCT
Arg
>WENV183430969
OMBQ01000727
175868
Bacillota
GTT
Asn
>WENV183430970
OMBQ01000731
398852
Bacillota
CTC
Glu
>WENV183430980
OMBQ01000769
190476
Bacillota
CAT
Met
>WENV183430981
OMBQ01000769
398832
Bacillota
TTC
Glu
>WENV183431004
OMBQ01000830
99852
Bacillota
GTA
Tyr
>WENV183431006
OMBQ01000837
175868
Bacillota
GTT
Asn
>WENV183431033
OMBQ01000926
280428
Bacillota
GAA
Phe
>WENV183431040
OMBQ01000968
73009
Bacillota
CAG
Leu
>WENV183431054
OMBQ01001034
290325
Bacillota
GCC
Gly
>WENV183431071
OMBQ01001102
280444
Bacillota
GGT
Thr
>WENV183431081
OMBQ01001162
280447
Bacillota
GAC
Val
>WENV183431097
OMBQ01001252
56074
Bacillota
TGA
Ser
>WENV183431098
OMBQ01001252
5692
Bacillota
GCT
Ser
>WENV183431117
OMBQ01001312
280444
Bacillota
GGT
Thr
>WENV183431123
OMBQ01001357
480322
Bacillota
CTG
Gln
>WENV183431124
OMBQ01001364
480322
Bacillota
CTG
Gln
>WENV183431134
OMBQ01001404
280473
Bacillota
TGG
Pro
>WENV183431140
OMBQ01001448
73009
Bacillota
CAG
Leu
>WENV183431149
OMBQ01001511
190476
Bacillota
CAT
Met
>WENV183431150
OMBQ01001511
398832
Bacillota
TTC
Glu
>WENV183431153
OMBQ01001529
175831
Bacillota
ACG
Arg
>WENV183431154
OMBQ01001533
179755
Bacillota
CCG
Arg
>WENV183431157
OMBQ01001579
178152
Bacillota
GTT
Asn
>WENV183431165
OMBQ01001625
280473
Bacillota
TGG
Pro
>WENV183431168
OMBQ01001662
398833
Bacillota
TGT
Thr
>WENV183431183
OMBQ01001795
175842
Bacillota
CAC
Val
>WENV183431198
OMBQ01001915
175842
Bacillota
CAC
Val
>WENV183431202
OMBQ01001980
99852
Bacillota
GTA
Tyr
>WENV183431216
OMBQ01002166
280473
Bacillota
TGG
Pro
>WENV183431236
OMBQ01002277
398854
Bacillota
CTC
Glu
>WENV183431237
OMBQ01002277
175868
Bacillota
GTT
Asn
>WENV183431249
OMBQ01002463
401685
Bacillota
TTG
Gln
>WENV183431250
OMBQ01002463
309916
Bacillota
TTT
Lys
>WENV183431264
OMBQ01002616
481217
Bacillota
GCA
Cys
>WENV183431272
OMBQ01002719
480322
Bacillota
CTG
Gln
>WENV183431273
OMBQ01002719
291581
Bacillota
CGG
Pro
>WENV183431274
OMBQ01002761
73009
Bacillota
CAG
Leu
>WENV183431275
OMBQ01002798
175859
Bacillota
TCT
Arg
>WENV183431277
OMBQ01002798
73009
Bacillota
CAG
Leu
>WENV183431280
OMBQ01002832
291576
Bacillota
CCC
Gly
>WENV183431316
OMBQ01003168
175849
Bacillota
GTC
Asp
>WENV183431317
OMBQ01003168
280444
Bacillota
GGT
Thr
>WENV183431320
OMBQ01003176
187364
Bacillota
CAT
Met
>WENV183431321
OMBQ01003190
398833
Bacillota
TGT
Thr
>WENV183431322
OMBQ01003190
99852
Bacillota
GTA
Tyr
>WENV183431323
OMBQ01003203
179755
Bacillota
CCG
Arg
>WENV183431336
OMBQ01003353
510477
Bacillota
TCC
Gly
>WENV183431348
OMBQ01003523
280447
Bacillota
GAC
Val
>WENV183431371
OMBQ01003993
179755
Bacillota
CCG
Arg
>WENV183431377
OMBQ01004095
483485
Bacillota
CCC
Gly
>WENV183431413
OMBQ01004854
398854
Bacillota
CTC
Glu
>WENV183431414
OMBQ01004854
175868
Bacillota
GTT
Asn
>WENV183431462
OMBQ01006142
497729
Bacillota
CCA
Trp
>WENV183431463
OMBQ01006231
184497
Bacillota
GGG
Pro
>WENV183431475
OMBQ01006687
398857
Bacillota
TTC
Glu
>WENV183431486
OMBQ01006881
46835
Bacillota
TAA
Leu
>WENV183431530
OMBQ01007959
284627
Bacillota
GAA
Phe
>WENV183431531
OMBQ01007959
484885
Bacillota
TCC
Gly
>WENV183431545
OMBQ01008556
323864
Bacillota
TGC
Ala
>WENV183431551
OMBQ01008885
398833
Bacillota
TGT
Thr
>WENV183431557
OMBQ01009198
480322
Bacillota
CTG
Gln
>WENV183431633
OMBQ01013245
303718
Bacillota
TGT
Thr
>WENV183431663
OMBQ01014901
480324
Bacillota
TTG
Gln
>WENV183431772
OMBQ01025028
284627
Bacillota
GAA
Phe
>WENV183431795
OMBQ01029588
118669
Bacillota
GTA
Tyr
>WENV183431797
OMBQ01029612
201856
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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