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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183453565
OMDE01000019
317482
Bacillota
TAC
Val
>WENV183453645
OMDE01000252
175842
Bacillota
CAC
Val
>WENV183453650
OMDE01000284
175831
Bacillota
ACG
Arg
>WENV183453673
OMDE01000415
356775
Bacillota
TGT
Thr
>WENV183453684
OMDE01000514
73009
Bacillota
CAG
Leu
>WENV183453693
OMDE01000699
5692
Bacillota
GCT
Ser
>WENV183453692
OMDE01000699
56074
Bacillota
TGA
Ser
>WENV183453695
OMDE01000723
280473
Bacillota
TGG
Pro
>WENV183453726
OMDE01001215
99852
Bacillota
GTA
Tyr
>WENV183453732
OMDE01001359
175859
Bacillota
TCT
Arg
>WENV183453736
OMDE01001467
291576
Bacillota
CCC
Gly
>WENV183453767
OMDE01002030
179755
Bacillota
CCG
Arg
>WENV183453776
OMDE01002401
175868
Bacillota
GTT
Asn
>WENV183453775
OMDE01002401
398854
Bacillota
CTC
Glu
>WENV183453838
OMDE01005977
398833
Bacillota
TGT
Thr
>WENV183453846
OMDE01006676
405363
Bacillota
GCA
Cys
>WENV183453853
OMDE01007359
280473
Bacillota
TGG
Pro
>WENV183453855
OMDE01007370
480324
Bacillota
TTG
Gln
>WENV183453873
OMDE01008952
280444
Bacillota
GGT
Thr
>WENV183453872
OMDE01008952
175849
Bacillota
GTC
Asp
>WENV183453885
OMDE01011160
280447
Bacillota
GAC
Val
>WENV183453920
OMDE01016741
480322
Bacillota
CTG
Gln
>WENV183453936
OMDE01019434
175825
Bacillota
GAT
Ile
>WENV183453968
OMDE01027926
194260
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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