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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183498351
OMGO01012644
200563
Bacillota
TGG
Pro
>WENV183498165
OMGO01000673
99852
Bacillota
GTA
Tyr
>WENV183498324
OMGO01009885
343590
Bacillota
GCC
Gly
>WENV183498230
OMGO01002038
349107
Bacillota
GCC
Gly
>WENV183498164
OMGO01000673
405363
Bacillota
GCA
Cys
>WENV183498229
OMGO01002038
280428
Bacillota
GAA
Phe
>WENV183498350
OMGO01012644
280644
Bacillota
CCA
Trp
>WENV183498203
OMGO01001205
175842
Bacillota
CAC
Val
>WENV183498432
OMGO01027449
280639
Bacillota
TTT
Lys
>WENV183498354
OMGO01013143
348419
Bacillota
GTT
Asn
>WENV183498424
OMGO01026283
184497
Bacillota
GGG
Pro
>WENV183498407
OMGO01021435
20360
Bacillota
TGA
Ser
>WENV183498447
OMGO01031569
179176
Bacillota
ACG
Arg
>WENV183498422
OMGO01026071
291553
Bacillota
GAA
Phe
>WENV183498426
OMGO01026810
184687
Bacillota
CAT
Met
>WENV183498270
OMGO01004422
215243
Bacillota
CAT
Met
>WENV183498238
OMGO01002274
190476
Bacillota
CAT
Met
>WENV183498345
OMGO01012644
176014
Bacillota
TCT
Arg
>WENV183498208
OMGO01001237
280447
Bacillota
GAC
Val
>WENV183498124
OMGO01000344
5692
Bacillota
GCT
Ser
>WENV183498169
OMGO01000706
175825
Bacillota
GAT
Ile
>WENV183498214
OMGO01001413
73009
Bacillota
CAG
Leu
>WENV183498347
OMGO01012644
52432
Bacillota
TGA
Ser
>WENV183498313
OMGO01008181
407726
Bacillota
CTG
Gln
>WENV183498405
OMGO01020591
129143
Bacillota
TAG
Leu
>WENV183498177
OMGO01000741
291581
Bacillota
CGG
Pro
>WENV183498193
OMGO01000987
175859
Bacillota
TCT
Arg
>WENV183498297
OMGO01006612
398835
Bacillota
GCC
Gly
>WENV183498168
OMGO01000706
280436
Bacillota
TGC
Ala
>WENV183498190
OMGO01000931
175831
Bacillota
ACG
Arg
>WENV183498295
OMGO01006174
450453
Bacillota
CTC
Glu
>WENV183498315
OMGO01008462
295350
Bacillota
TGC
Ala
>WENV183498419
OMGO01025879
484885
Bacillota
TCC
Gly
>WENV183498176
OMGO01000741
480322
Bacillota
CTG
Gln
>WENV183498222
OMGO01001660
175868
Bacillota
GTT
Asn
>WENV183498221
OMGO01001660
398854
Bacillota
CTC
Glu
>WENV183498191
OMGO01000939
291576
Bacillota
CCC
Gly
>WENV183498331
OMGO01010710
400963
Bacillota
GTT
Asn
>WENV183498065
OMGO01000163
497729
Bacillota
CCA
Trp
>WENV183498445
OMGO01031208
175911
Bacillota
GTC
Asp
>WENV183498330
OMGO01010647
292374
Bacillota
TGC
Ala
>WENV183498206
OMGO01001209
280444
Bacillota
GGT
Thr
>WENV183498133
OMGO01000416
179755
Bacillota
CCG
Arg
>WENV183498421
OMGO01026071
280547
Bacillota
GTC
Asp
>WENV183498334
OMGO01010765
46835
Bacillota
TAA
Leu
>WENV183498239
OMGO01002274
398832
Bacillota
TTC
Glu
>WENV183498337
OMGO01011063
118669
Bacillota
GTA
Tyr
>WENV183498282
OMGO01005169
175915
Bacillota
GTC
Asp
>WENV183497991
OMGO01000081
280476
Bacillota
TTT
Lys
>WENV183498101
OMGO01000226
280476
Bacillota
TTT
Lys
>WENV183498388
OMGO01018970
20943
Bacillota
CGA
Ser
>WENV183498329
OMGO01010647
201856
Bacillota
GAT
Ile
>WENV183497858
OMGO01000001
321248
Bacillota
TAC
Val
>WENV183497860
OMGO01000001
321248
Bacillota
TAC
Val
>WENV183498144
OMGO01000508
398833
Bacillota
TGT
Thr
>WENV183498205
OMGO01001209
175849
Bacillota
GTC
Asp
>WENV183497988
OMGO01000081
179166
Bacillota
TCT
Arg
>WENV183498123
OMGO01000344
56074
Bacillota
TGA
Ser
>WENV183498209
OMGO01001243
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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