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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183522723
ONZR01001419
99852
Bacillota
GTA
Tyr
>WENV183522731
ONZR01001508
99852
Bacillota
GTA
Tyr
>WENV183522927
ONZR01011705
99852
Bacillota
GTA
Tyr
>WENV183522943
ONZR01012998
187706
Bacillota
TGG
Pro
>WENV183522606
ONZR01000367
349107
Bacillota
GCC
Gly
>WENV183522835
ONZR01004039
349107
Bacillota
GCC
Gly
>WENV183522889
ONZR01006952
480520
Bacillota
TCC
Gly
>WENV183522605
ONZR01000367
280428
Bacillota
GAA
Phe
>WENV183522699
ONZR01000817
356660
Bacillota
CTT
Lys
>WENV183522818
ONZR01003432
56397
Bacillota
CAA
Leu
>WENV183522938
ONZR01012998
285945
Bacillota
TTT
Lys
>WENV183522910
ONZR01008878
141454
Bacillota
TAG
Leu
>WENV183522904
ONZR01008878
480359
Bacillota
TCC
Gly
>WENV183522765
ONZR01002062
175842
Bacillota
CAC
Val
>WENV183522908
ONZR01008878
459011
Bacillota
TGT
Thr
>WENV183522905
ONZR01008878
298270
Bacillota
TAC
Val
>WENV183522748
ONZR01001845
176018
Bacillota
CAT
Met
>WENV183522840
ONZR01004220
407852
Bacillota
TTC
Glu
>WENV183522922
ONZR01010495
407852
Bacillota
TTC
Glu
>WENV183522887
ONZR01006952
141334
Bacillota
TAG
Leu
>WENV183522525
ONZR01000162
280447
Bacillota
GAC
Val
>WENV183522663
ONZR01000597
280447
Bacillota
GAC
Val
>WENV183522708
ONZR01001044
280447
Bacillota
GAC
Val
>WENV183522653
ONZR01000541
73009
Bacillota
CAG
Leu
>WENV183522727
ONZR01001464
73009
Bacillota
CAG
Leu
>WENV183522730
ONZR01001508
73009
Bacillota
CAG
Leu
>WENV183522578
ONZR01000264
291581
Bacillota
CGG
Pro
>WENV183522650
ONZR01000518
291581
Bacillota
CGG
Pro
>WENV183522639
ONZR01000490
175859
Bacillota
TCT
Arg
>WENV183522725
ONZR01001464
175859
Bacillota
TCT
Arg
>WENV183522893
ONZR01007575
398835
Bacillota
GCC
Gly
>WENV183522884
ONZR01006952
330433
Bacillota
GTG
His
>WENV183522907
ONZR01008878
280641
Bacillota
GTT
Asn
>WENV183522561
ONZR01000216
175831
Bacillota
ACG
Arg
>WENV183522793
ONZR01002629
175831
Bacillota
ACG
Arg
>WENV183522915
ONZR01010495
9377
Bacillota
TGA
Ser
>WENV183522745
ONZR01001845
176015
Bacillota
TGG
Pro
>WENV183522937
ONZR01012998
282730
Bacillota
TAC
Val
>WENV183522942
ONZR01012998
238199
Bacillota
ACG
Arg
>WENV183522817
ONZR01003432
282731
Bacillota
GTG
His
>WENV183522577
ONZR01000264
480322
Bacillota
CTG
Gln
>WENV183522649
ONZR01000518
480322
Bacillota
CTG
Gln
>WENV183522711
ONZR01001134
480322
Bacillota
CTG
Gln
>WENV183522729
ONZR01001483
480322
Bacillota
CTG
Gln
>WENV183522881
ONZR01006741
401685
Bacillota
TTG
Gln
>WENV183522696
ONZR01000774
175868
Bacillota
GTT
Asn
>WENV183522695
ONZR01000774
398854
Bacillota
CTC
Glu
>WENV183522743
ONZR01001838
398854
Bacillota
CTC
Glu
>WENV183522436
ONZR01000036
291576
Bacillota
CCC
Gly
>WENV183522584
ONZR01000291
480324
Bacillota
TTG
Gln
>WENV183522661
ONZR01000589
480324
Bacillota
TTG
Gln
>WENV183522856
ONZR01005134
497729
Bacillota
CCA
Trp
>WENV183522930
ONZR01012112
398857
Bacillota
TTC
Glu
>WENV183522664
ONZR01000625
280444
Bacillota
GGT
Thr
>WENV183522666
ONZR01000625
280444
Bacillota
GGT
Thr
>WENV183522672
ONZR01000662
280444
Bacillota
GGT
Thr
>WENV183522675
ONZR01000662
280444
Bacillota
GGT
Thr
>WENV183522886
ONZR01006952
354380
Bacillota
TTT
Lys
>WENV183522940
ONZR01012998
294385
Bacillota
TGT
Thr
>WENV183522553
ONZR01000201
179755
Bacillota
CCG
Arg
>WENV183522766
ONZR01002069
179755
Bacillota
CCG
Arg
>WENV183522918
ONZR01010495
283719
Bacillota
GAA
Phe
>WENV183522917
ONZR01010495
330582
Bacillota
GTC
Asp
>WENV183522890
ONZR01006952
203851
Bacillota
TCT
Arg
>WENV183522921
ONZR01010495
21320
Bacillota
GCT
Ser
>WENV183522757
ONZR01002002
298260
Bacillota
GTT
Asn
>WENV183522872
ONZR01006302
369718
Bacillota
CTC
Glu
>WENV183522880
ONZR01006741
175857
Bacillota
GTG
His
>WENV183522926
ONZR01011705
398833
Bacillota
TGT
Thr
>WENV183522604
ONZR01000367
175849
Bacillota
GTC
Asp
>WENV183522665
ONZR01000625
175849
Bacillota
GTC
Asp
>WENV183522674
ONZR01000662
175849
Bacillota
GTC
Asp
>WENV183522971
ONZR01019604
280486
Bacillota
TGC
Ala
>WENV183522485
ONZR01000088
56074
Bacillota
TGA
Ser
>WENV183522608
ONZR01000368
56074
Bacillota
TGA
Ser
>WENV183522903
ONZR01008878
443965
Bacillota
>WENV183522700
ONZR01000836
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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