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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183532265
OOAD01000070
289123
Bacillota
GGT
Thr
>WENV183532274
OOAD01000086
229015
Bacillota
GTG
His
>WENV183532355
OOAD01000267
175842
Bacillota
CAC
Val
>WENV183532377
OOAD01000344
175859
Bacillota
TCT
Arg
>WENV183532390
OOAD01000377
73009
Bacillota
CAG
Leu
>WENV183532403
OOAD01000434
280476
Bacillota
TTT
Lys
>WENV183532411
OOAD01000476
343590
Bacillota
GCC
Gly
>WENV183532424
OOAD01000548
190476
Bacillota
CAT
Met
>WENV183532425
OOAD01000548
398832
Bacillota
TTC
Glu
>WENV183532446
OOAD01000764
280444
Bacillota
GGT
Thr
>WENV183532447
OOAD01000765
186123
Bacillota
GTC
Asp
>WENV183532448
OOAD01000765
291634
Bacillota
GAA
Phe
>WENV183532474
OOAD01000924
280447
Bacillota
GAC
Val
>WENV183532476
OOAD01000970
480324
Bacillota
TTG
Gln
>WENV183532477
OOAD01000971
284627
Bacillota
GAA
Phe
>WENV183532479
OOAD01000976
398833
Bacillota
TGT
Thr
>WENV183532496
OOAD01001149
480322
Bacillota
CTG
Gln
>WENV183532497
OOAD01001149
291581
Bacillota
CGG
Pro
>WENV183532519
OOAD01001409
480322
Bacillota
CTG
Gln
>WENV183532520
OOAD01001409
291581
Bacillota
CGG
Pro
>WENV183532523
OOAD01001415
73009
Bacillota
CAG
Leu
>WENV183532530
OOAD01001484
46835
Bacillota
TAA
Leu
>WENV183532537
OOAD01001551
510477
Bacillota
TCC
Gly
>WENV183532538
OOAD01001551
175857
Bacillota
GTG
His
>WENV183532544
OOAD01001625
186123
Bacillota
GTC
Asp
>WENV183532545
OOAD01001625
405393
Bacillota
GCC
Gly
>WENV183532546
OOAD01001625
291629
Bacillota
CCA
Trp
>WENV183532548
OOAD01001637
405363
Bacillota
GCA
Cys
>WENV183532553
OOAD01001698
480322
Bacillota
CTG
Gln
>WENV183532555
OOAD01001710
480324
Bacillota
TTG
Gln
>WENV183532558
OOAD01001766
179755
Bacillota
CCG
Arg
>WENV183532575
OOAD01002146
175868
Bacillota
GTT
Asn
>WENV183532577
OOAD01002200
480322
Bacillota
CTG
Gln
>WENV183532578
OOAD01002200
291581
Bacillota
CGG
Pro
>WENV183532588
OOAD01002454
280444
Bacillota
GGT
Thr
>WENV183532589
OOAD01002514
175831
Bacillota
ACG
Arg
>WENV183532593
OOAD01002569
179755
Bacillota
CCG
Arg
>WENV183532604
OOAD01002733
484885
Bacillota
TCC
Gly
>WENV183532607
OOAD01002769
27216
Bacillota
GCT
Ser
>WENV183532625
OOAD01003088
56074
Bacillota
TGA
Ser
>WENV183532626
OOAD01003088
5692
Bacillota
GCT
Ser
>WENV183532629
OOAD01003181
190476
Bacillota
CAT
Met
>WENV183532630
OOAD01003181
398832
Bacillota
TTC
Glu
>WENV183532634
OOAD01003365
118669
Bacillota
GTA
Tyr
>WENV183532646
OOAD01003643
175849
Bacillota
GTC
Asp
>WENV183532652
OOAD01003769
175859
Bacillota
TCT
Arg
>WENV183532656
OOAD01003968
280473
Bacillota
TGG
Pro
>WENV183532657
OOAD01003997
73009
Bacillota
CAG
Leu
>WENV183532660
OOAD01004103
175868
Bacillota
GTT
Asn
>WENV183532687
OOAD01004980
398854
Bacillota
CTC
Glu
>WENV183532695
OOAD01005431
280473
Bacillota
TGG
Pro
>WENV183532696
OOAD01005457
280447
Bacillota
GAC
Val
>WENV183532709
OOAD01005907
280447
Bacillota
GAC
Val
>WENV183532717
OOAD01006263
179176
Bacillota
ACG
Arg
>WENV183532738
OOAD01007199
497729
Bacillota
CCA
Trp
>WENV183532743
OOAD01007660
349107
Bacillota
GCC
Gly
>WENV183532748
OOAD01007913
56074
Bacillota
TGA
Ser
>WENV183532749
OOAD01007913
5692
Bacillota
GCT
Ser
>WENV183532756
OOAD01008510
99852
Bacillota
GTA
Tyr
>WENV183532782
OOAD01010344
285601
Bacillota
TTC
Glu
>WENV183532829
OOAD01014126
480322
Bacillota
CTG
Gln
>WENV183532832
OOAD01014389
280473
Bacillota
TGG
Pro
>WENV183532836
OOAD01014681
284627
Bacillota
GAA
Phe
>WENV183532849
OOAD01016041
398857
Bacillota
TTC
Glu
>WENV183532869
OOAD01018316
295350
Bacillota
TGC
Ala
>WENV183532873
OOAD01018890
176015
Bacillota
TGG
Pro
>WENV183532874
OOAD01018890
176019
Bacillota
GTG
His
>WENV183532875
OOAD01018890
480360
Bacillota
GCA
Cys
>WENV183532920
OOAD01024648
443965
Bacillota
>WENV183532921
OOAD01024648
480359
Bacillota
TCC
Gly
>WENV183532931
OOAD01027094
285756
Bacillota
GCC
Gly
>WENV183532946
OOAD01029774
280500
Bacillota
TGC
Ala
>WENV183532949
OOAD01030547
298260
Bacillota
GTT
Asn
>WENV183532981
OOAD01036474
281417
Bacillota
GTC
Asp
>WENV183532995
OOAD01039418
290391
Bacillota
TAC
Val
>WENV183533009
OOAD01043133
201856
Bacillota
GAT
Ile
>WENV183533018
OOAD01045668
481217
Bacillota
GCA
Cys
>WENV183533021
OOAD01047931
353153
Bacillota
TGC
Ala
>WENV183533023
OOAD01049282
204381
Bacillota
GAT
Ile
>WENV183533054
OOAD01058413
176771
Bacillota
TCT
Arg
>WENV183533055
OOAD01058413
282757
Bacillota
GTG
His
>WENV183533059
OOAD01059328
480520
Bacillota
TCC
Gly
>WENV183533060
OOAD01059328
203851
Bacillota
TCT
Arg
>WENV183533061
OOAD01059328
330433
Bacillota
GTG
His
>WENV183533063
OOAD01059328
354380
Bacillota
TTT
Lys
>WENV183533094
OOAD01071665
280428
Bacillota
GAA
Phe
>WENV183533098
OOAD01073675
291576
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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