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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
174 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183538912
OOAI01000059
99852
Bacillota
GTA
Tyr
>WENV183539116
OOAI01000337
99852
Bacillota
GTA
Tyr
>WENV183539281
OOAI01001268
99852
Bacillota
GTA
Tyr
>WENV183539309
OOAI01001807
99852
Bacillota
GTA
Tyr
>WENV183539332
OOAI01002680
343590
Bacillota
GCC
Gly
>WENV183539333
OOAI01002680
343590
Bacillota
GCC
Gly
>WENV183538914
OOAI01000061
349107
Bacillota
GCC
Gly
>WENV183538919
OOAI01000072
349107
Bacillota
GCC
Gly
>WENV183538944
OOAI01000098
349107
Bacillota
GCC
Gly
>WENV183539020
OOAI01000177
349107
Bacillota
GCC
Gly
>WENV183539088
OOAI01000292
349107
Bacillota
GCC
Gly
>WENV183539127
OOAI01000378
349107
Bacillota
GCC
Gly
>WENV183539186
OOAI01000577
349107
Bacillota
GCC
Gly
>WENV183539234
OOAI01000812
349107
Bacillota
GCC
Gly
>WENV183539279
OOAI01001268
349107
Bacillota
GCC
Gly
>WENV183539289
OOAI01001459
349107
Bacillota
GCC
Gly
>WENV183538920
OOAI01000072
405363
Bacillota
GCA
Cys
>WENV183538945
OOAI01000098
405363
Bacillota
GCA
Cys
>WENV183539187
OOAI01000577
405363
Bacillota
GCA
Cys
>WENV183539280
OOAI01001268
405363
Bacillota
GCA
Cys
>WENV183538802
OOAI01000006
281077
Bacillota
GTT
Asn
>WENV183539019
OOAI01000177
280428
Bacillota
GAA
Phe
>WENV183539091
OOAI01000292
280428
Bacillota
GAA
Phe
>WENV183539126
OOAI01000378
280428
Bacillota
GAA
Phe
>WENV183539233
OOAI01000812
280428
Bacillota
GAA
Phe
>WENV183539252
OOAI01000941
280428
Bacillota
GAA
Phe
>WENV183539313
OOAI01001881
280428
Bacillota
GAA
Phe
>WENV183539491
OOAI01026371
280428
Bacillota
GAA
Phe
>WENV183539385
OOAI01006380
141454
Bacillota
TAG
Leu
>WENV183539477
OOAI01018446
480359
Bacillota
TCC
Gly
>WENV183539089
OOAI01000292
280466
Bacillota
TAC
Val
>WENV183539114
OOAI01000336
284746
Bacillota
CTG
Gln
>WENV183539383
OOAI01006380
418726
Bacillota
TGT
Thr
>WENV183539388
OOAI01006380
280642
Bacillota
TTG
Gln
>WENV183538818
OOAI01000007
175842
Bacillota
CAC
Val
>WENV183539124
OOAI01000370
175842
Bacillota
CAC
Val
>WENV183539149
OOAI01000462
175842
Bacillota
CAC
Val
>WENV183539215
OOAI01000707
175842
Bacillota
CAC
Val
>WENV183539389
OOAI01006380
280639
Bacillota
TTT
Lys
>WENV183539472
OOAI01018446
280639
Bacillota
TTT
Lys
>WENV183539493
OOAI01026991
348419
Bacillota
GTT
Asn
>WENV183539392
OOAI01006380
176018
Bacillota
CAT
Met
>WENV183538985
OOAI01000140
190476
Bacillota
CAT
Met
>WENV183539039
OOAI01000214
190476
Bacillota
CAT
Met
>WENV183539258
OOAI01001000
190476
Bacillota
CAT
Met
>WENV183539387
OOAI01006380
176014
Bacillota
TCT
Arg
>WENV183539386
OOAI01006380
398916
Bacillota
>WENV183539024
OOAI01000191
280447
Bacillota
GAC
Val
>WENV183539053
OOAI01000235
280447
Bacillota
GAC
Val
>WENV183539141
OOAI01000431
280447
Bacillota
GAC
Val
>WENV183539172
OOAI01000530
280447
Bacillota
GAC
Val
>WENV183539180
OOAI01000564
280447
Bacillota
GAC
Val
>WENV183539205
OOAI01000676
280447
Bacillota
GAC
Val
>WENV183539229
OOAI01000782
280447
Bacillota
GAC
Val
>WENV183539242
OOAI01000835
280447
Bacillota
GAC
Val
>WENV183539396
OOAI01006380
480360
Bacillota
GCA
Cys
>WENV183539473
OOAI01018446
480360
Bacillota
GCA
Cys
>WENV183539010
OOAI01000159
5692
Bacillota
GCT
Ser
>WENV183539074
OOAI01000264
5692
Bacillota
GCT
Ser
>WENV183539203
OOAI01000672
5692
Bacillota
GCT
Ser
>WENV183538890
OOAI01000045
359682
Bacillota
TAC
Val
>WENV183539050
OOAI01000227
359682
Bacillota
TAC
Val
>WENV183538911
OOAI01000059
73009
Bacillota
CAG
Leu
>WENV183538992
OOAI01000146
73009
Bacillota
CAG
Leu
>WENV183539044
OOAI01000226
73009
Bacillota
CAG
Leu
>WENV183539169
OOAI01000515
73009
Bacillota
CAG
Leu
>WENV183539194
OOAI01000611
73009
Bacillota
CAG
Leu
>WENV183539197
OOAI01000625
73009
Bacillota
CAG
Leu
>WENV183539198
OOAI01000625
73009
Bacillota
CAG
Leu
>WENV183539230
OOAI01000787
73009
Bacillota
CAG
Leu
>WENV183539327
OOAI01002320
73009
Bacillota
CAG
Leu
>WENV183539002
OOAI01000153
291581
Bacillota
CGG
Pro
>WENV183539028
OOAI01000197
291581
Bacillota
CGG
Pro
>WENV183539184
OOAI01000577
291581
Bacillota
CGG
Pro
>WENV183539224
OOAI01000767
291581
Bacillota
CGG
Pro
>WENV183538904
OOAI01000051
175859
Bacillota
TCT
Arg
>WENV183538933
OOAI01000087
175859
Bacillota
TCT
Arg
>WENV183539167
OOAI01000515
175859
Bacillota
TCT
Arg
>WENV183539353
OOAI01004640
398835
Bacillota
GCC
Gly
>WENV183539382
OOAI01006380
280641
Bacillota
GTT
Asn
>WENV183539211
OOAI01000698
21311
Bacillota
GCT
Ser
>WENV183539267
OOAI01001062
21311
Bacillota
GCT
Ser
>WENV183539036
OOAI01000212
175831
Bacillota
ACG
Arg
>WENV183539413
OOAI01007447
175831
Bacillota
ACG
Arg
>WENV183539468
OOAI01017111
175831
Bacillota
ACG
Arg
>WENV183539478
OOAI01019159
175831
Bacillota
ACG
Arg
>WENV183539155
OOAI01000476
179810
Bacillota
TCT
Arg
>WENV183538928
OOAI01000079
284627
Bacillota
GAA
Phe
>WENV183538967
OOAI01000118
284627
Bacillota
GAA
Phe
>WENV183539394
OOAI01006380
176015
Bacillota
TGG
Pro
>WENV183538870
OOAI01000030
480322
Bacillota
CTG
Gln
>WENV183538881
OOAI01000040
480322
Bacillota
CTG
Gln
>WENV183538950
OOAI01000103
480322
Bacillota
CTG
Gln
>WENV183539001
OOAI01000153
480322
Bacillota
CTG
Gln
>WENV183539027
OOAI01000197
480322
Bacillota
CTG
Gln
>WENV183539183
OOAI01000577
480322
Bacillota
CTG
Gln
>WENV183539223
OOAI01000767
480322
Bacillota
CTG
Gln
>WENV183539293
OOAI01001494
480322
Bacillota
CTG
Gln
>WENV183538880
OOAI01000038
175868
Bacillota
GTT
Asn
>WENV183539016
OOAI01000171
175868
Bacillota
GTT
Asn
>WENV183539086
OOAI01000275
175868
Bacillota
GTT
Asn
>WENV183539120
OOAI01000353
175868
Bacillota
GTT
Asn
>WENV183539227
OOAI01000778
175868
Bacillota
GTT
Asn
>WENV183539270
OOAI01001101
175868
Bacillota
GTT
Asn
>WENV183538888
OOAI01000045
284744
Bacillota
TTT
Lys
>WENV183539045
OOAI01000227
284744
Bacillota
TTT
Lys
>WENV183539300
OOAI01001583
322848
Bacillota
CTT
Lys
>WENV183539349
OOAI01004175
322848
Bacillota
CTT
Lys
>WENV183539368
OOAI01005036
322848
Bacillota
CTT
Lys
>WENV183539015
OOAI01000171
398854
Bacillota
CTC
Glu
>WENV183539085
OOAI01000275
398854
Bacillota
CTC
Glu
>WENV183539119
OOAI01000353
398854
Bacillota
CTC
Glu
>WENV183539367
OOAI01005036
398854
Bacillota
CTC
Glu
>WENV183538915
OOAI01000061
291576
Bacillota
CCC
Gly
>WENV183538930
OOAI01000080
291576
Bacillota
CCC
Gly
>WENV183539054
OOAI01000240
291576
Bacillota
CCC
Gly
>WENV183539248
OOAI01000902
291576
Bacillota
CCC
Gly
>WENV183539022
OOAI01000182
480324
Bacillota
TTG
Gln
>WENV183539025
OOAI01000194
480324
Bacillota
TTG
Gln
>WENV183539185
OOAI01000577
480324
Bacillota
TTG
Gln
>WENV183539222
OOAI01000767
480324
Bacillota
TTG
Gln
>WENV183539395
OOAI01006380
176019
Bacillota
GTG
His
>WENV183539471
OOAI01018446
176019
Bacillota
GTG
His
>WENV183538810
OOAI01000006
179935
Bacillota
GTC
Asp
>WENV183539048
OOAI01000227
179935
Bacillota
GTC
Asp
>WENV183539398
OOAI01006654
398857
Bacillota
TTC
Glu
>WENV183539494
OOAI01026991
398857
Bacillota
TTC
Glu
>WENV183538939
OOAI01000091
280444
Bacillota
GGT
Thr
>WENV183538990
OOAI01000144
280444
Bacillota
GGT
Thr
>WENV183539100
OOAI01000298
280444
Bacillota
GGT
Thr
>WENV183539102
OOAI01000298
280444
Bacillota
GGT
Thr
>WENV183539146
OOAI01000450
280444
Bacillota
GGT
Thr
>WENV183539170
OOAI01000518
280444
Bacillota
GGT
Thr
>WENV183539243
OOAI01000836
280444
Bacillota
GGT
Thr
>WENV183538987
OOAI01000140
179755
Bacillota
CCG
Arg
>WENV183539006
OOAI01000155
179755
Bacillota
CCG
Arg
>WENV183539038
OOAI01000214
179755
Bacillota
CCG
Arg
>WENV183539217
OOAI01000721
179755
Bacillota
CCG
Arg
>WENV183538817
OOAI01000006
401111
Bacillota
TTC
Glu
>WENV183538889
OOAI01000045
401111
Bacillota
TTC
Glu
>WENV183539046
OOAI01000227
401111
Bacillota
TTC
Glu
>WENV183539316
OOAI01001893
46835
Bacillota
TAA
Leu
>WENV183538811
OOAI01000006
284742
Bacillota
GAA
Phe
>WENV183539049
OOAI01000227
284742
Bacillota
GAA
Phe
>WENV183538986
OOAI01000140
398832
Bacillota
TTC
Glu
>WENV183539005
OOAI01000155
398832
Bacillota
TTC
Glu
>WENV183539040
OOAI01000214
398832
Bacillota
TTC
Glu
>WENV183539259
OOAI01001000
398832
Bacillota
TTC
Glu
>WENV183538926
OOAI01000079
118669
Bacillota
GTA
Tyr
>WENV183538965
OOAI01000118
118669
Bacillota
GTA
Tyr
>WENV183539315
OOAI01001893
175915
Bacillota
GTC
Asp
>WENV183539361
OOAI01004905
280476
Bacillota
TTT
Lys
>WENV183539369
OOAI01005124
398852
Bacillota
CTC
Glu
>WENV183539485
OOAI01020921
201856
Bacillota
GAT
Ile
>WENV183539156
OOAI01000476
175857
Bacillota
GTG
His
>WENV183538909
OOAI01000057
398833
Bacillota
TGT
Thr
>WENV183539273
OOAI01001189
398833
Bacillota
TGT
Thr
>WENV183539299
OOAI01001580
398833
Bacillota
TGT
Thr
>WENV183538938
OOAI01000091
175849
Bacillota
GTC
Asp
>WENV183538943
OOAI01000098
175849
Bacillota
GTC
Asp
>WENV183538989
OOAI01000144
175849
Bacillota
GTC
Asp
>WENV183539090
OOAI01000292
175849
Bacillota
GTC
Asp
>WENV183539099
OOAI01000298
175849
Bacillota
GTC
Asp
>WENV183539358
OOAI01004837
280486
Bacillota
TGC
Ala
>WENV183539445
OOAI01010963
280486
Bacillota
TGC
Ala
>WENV183539009
OOAI01000159
56074
Bacillota
TGA
Ser
>WENV183539073
OOAI01000264
56074
Bacillota
TGA
Ser
>WENV183539202
OOAI01000672
56074
Bacillota
TGA
Ser
>WENV183539476
OOAI01018446
443965
Bacillota
>WENV183538940
OOAI01000091
280473
Bacillota
TGG
Pro
>WENV183539026
OOAI01000197
280473
Bacillota
TGG
Pro
>WENV183539060
OOAI01000251
280473
Bacillota
TGG
Pro
>WENV183539304
OOAI01001681
280473
Bacillota
TGG
Pro
>WENV183539319
OOAI01001990
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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