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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
125 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183540272
OOAJ01007320
99852
Bacillota
GTA
Tyr
>WENV183540307
OOAJ01009300
99852
Bacillota
GTA
Tyr
>WENV183540035
OOAJ01001697
349107
Bacillota
GCC
Gly
>WENV183540055
OOAJ01001968
349107
Bacillota
GCC
Gly
>WENV183540057
OOAJ01001979
349107
Bacillota
GCC
Gly
>WENV183540258
OOAJ01006843
349107
Bacillota
GCC
Gly
>WENV183540259
OOAJ01006843
405363
Bacillota
GCA
Cys
>WENV183539573
OOAJ01000037
281077
Bacillota
GTT
Asn
>WENV183540432
OOAJ01028589
290391
Bacillota
TAC
Val
>WENV183540054
OOAJ01001968
280428
Bacillota
GAA
Phe
>WENV183540300
OOAJ01008829
280428
Bacillota
GAA
Phe
>WENV183540423
OOAJ01027096
280428
Bacillota
GAA
Phe
>WENV183540426
OOAJ01027097
280428
Bacillota
GAA
Phe
>WENV183540418
OOAJ01026078
179917
Bacillota
CAT
Met
>WENV183540424
OOAJ01027097
280466
Bacillota
TAC
Val
>WENV183539920
OOAJ01001035
284746
Bacillota
CTG
Gln
>WENV183539812
OOAJ01000476
175842
Bacillota
CAC
Val
>WENV183540175
OOAJ01003748
175842
Bacillota
CAC
Val
>WENV183540252
OOAJ01006674
175842
Bacillota
CAC
Val
>WENV183540465
OOAJ01039008
184497
Bacillota
GGG
Pro
>WENV183539949
OOAJ01001172
179176
Bacillota
ACG
Arg
>WENV183540081
OOAJ01002284
190476
Bacillota
CAT
Met
>WENV183539813
OOAJ01000478
280447
Bacillota
GAC
Val
>WENV183539995
OOAJ01001452
280447
Bacillota
GAC
Val
>WENV183540074
OOAJ01002145
280447
Bacillota
GAC
Val
>WENV183540083
OOAJ01002306
280447
Bacillota
GAC
Val
>WENV183540184
OOAJ01004071
280447
Bacillota
GAC
Val
>WENV183540275
OOAJ01007478
280447
Bacillota
GAC
Val
>WENV183540286
OOAJ01007977
280447
Bacillota
GAC
Val
>WENV183539994
OOAJ01001447
5692
Bacillota
GCT
Ser
>WENV183540296
OOAJ01008621
5692
Bacillota
GCT
Ser
>WENV183539671
OOAJ01000158
280427
Bacillota
TAC
Val
>WENV183539675
OOAJ01000158
280427
Bacillota
TAC
Val
>WENV183539932
OOAJ01001101
280427
Bacillota
TAC
Val
>WENV183539823
OOAJ01000525
73009
Bacillota
CAG
Leu
>WENV183539953
OOAJ01001197
73009
Bacillota
CAG
Leu
>WENV183539976
OOAJ01001298
73009
Bacillota
CAG
Leu
>WENV183540142
OOAJ01003300
73009
Bacillota
CAG
Leu
>WENV183540162
OOAJ01003536
73009
Bacillota
CAG
Leu
>WENV183540302
OOAJ01008916
73009
Bacillota
CAG
Leu
>WENV183540389
OOAJ01020467
73009
Bacillota
CAG
Leu
>WENV183540278
OOAJ01007684
407726
Bacillota
CTG
Gln
>WENV183539843
OOAJ01000570
291581
Bacillota
CGG
Pro
>WENV183540115
OOAJ01002787
291581
Bacillota
CGG
Pro
>WENV183540400
OOAJ01022390
291581
Bacillota
CGG
Pro
>WENV183539705
OOAJ01000197
175859
Bacillota
TCT
Arg
>WENV183539990
OOAJ01001428
175859
Bacillota
TCT
Arg
>WENV183540070
OOAJ01002133
175859
Bacillota
TCT
Arg
>WENV183540093
OOAJ01002516
175859
Bacillota
TCT
Arg
>WENV183540450
OOAJ01033177
175847
Bacillota
GTC
Asp
>WENV183539882
OOAJ01000807
175831
Bacillota
ACG
Arg
>WENV183539987
OOAJ01001407
284627
Bacillota
GAA
Phe
>WENV183539572
OOAJ01000037
293309
Bacillota
GTT
Asn
>WENV183539524
OOAJ01000007
480322
Bacillota
CTG
Gln
>WENV183539615
OOAJ01000080
480322
Bacillota
CTG
Gln
>WENV183539842
OOAJ01000570
480322
Bacillota
CTG
Gln
>WENV183540114
OOAJ01002787
480322
Bacillota
CTG
Gln
>WENV183540273
OOAJ01007438
480322
Bacillota
CTG
Gln
>WENV183540303
OOAJ01008917
480322
Bacillota
CTG
Gln
>WENV183540399
OOAJ01022390
480322
Bacillota
CTG
Gln
>WENV183539633
OOAJ01000115
175868
Bacillota
GTT
Asn
>WENV183539801
OOAJ01000430
175868
Bacillota
GTT
Asn
>WENV183539892
OOAJ01000851
175868
Bacillota
GTT
Asn
>WENV183540100
OOAJ01002620
175868
Bacillota
GTT
Asn
>WENV183540172
OOAJ01003699
175868
Bacillota
GTT
Asn
>WENV183540262
OOAJ01006981
175868
Bacillota
GTT
Asn
>WENV183540309
OOAJ01009332
175868
Bacillota
GTT
Asn
>WENV183539645
OOAJ01000132
284744
Bacillota
TTT
Lys
>WENV183539774
OOAJ01000369
284744
Bacillota
TTT
Lys
>WENV183539799
OOAJ01000430
322848
Bacillota
CTT
Lys
>WENV183540107
OOAJ01002666
322848
Bacillota
CTT
Lys
>WENV183540348
OOAJ01013291
322848
Bacillota
CTT
Lys
>WENV183540364
OOAJ01015087
322848
Bacillota
CTT
Lys
>WENV183539800
OOAJ01000430
398854
Bacillota
CTC
Glu
>WENV183540106
OOAJ01002666
398854
Bacillota
CTC
Glu
>WENV183540171
OOAJ01003699
398854
Bacillota
CTC
Glu
>WENV183540261
OOAJ01006981
398854
Bacillota
CTC
Glu
>WENV183540363
OOAJ01015087
398854
Bacillota
CTC
Glu
>WENV183539707
OOAJ01000200
291576
Bacillota
CCC
Gly
>WENV183540220
OOAJ01005223
291576
Bacillota
CCC
Gly
>WENV183540325
OOAJ01011007
291576
Bacillota
CCC
Gly
>WENV183539898
OOAJ01000874
480324
Bacillota
TTG
Gln
>WENV183539950
OOAJ01001176
480324
Bacillota
TTG
Gln
>WENV183540431
OOAJ01028589
180688
Bacillota
GTC
Asp
>WENV183540244
OOAJ01006188
323864
Bacillota
TGC
Ala
>WENV183539718
OOAJ01000231
179935
Bacillota
GTC
Asp
>WENV183539777
OOAJ01000369
179935
Bacillota
GTC
Asp
>WENV183540349
OOAJ01013542
398857
Bacillota
TTC
Glu
>WENV183539754
OOAJ01000297
280444
Bacillota
GGT
Thr
>WENV183539854
OOAJ01000611
280444
Bacillota
GGT
Thr
>WENV183539856
OOAJ01000611
280444
Bacillota
GGT
Thr
>WENV183539888
OOAJ01000829
280444
Bacillota
GGT
Thr
>WENV183539890
OOAJ01000829
280444
Bacillota
GGT
Thr
>WENV183539891
OOAJ01000833
280444
Bacillota
GGT
Thr
>WENV183539903
OOAJ01000937
179755
Bacillota
CCG
Arg
>WENV183540045
OOAJ01001837
179755
Bacillota
CCG
Arg
>WENV183540139
OOAJ01003241
179755
Bacillota
CCG
Arg
>WENV183540306
OOAJ01009165
179755
Bacillota
CCG
Arg
>WENV183539646
OOAJ01000132
401111
Bacillota
TTC
Glu
>WENV183539725
OOAJ01000231
401111
Bacillota
TTC
Glu
>WENV183539775
OOAJ01000369
401111
Bacillota
TTC
Glu
>WENV183540173
OOAJ01003711
46835
Bacillota
TAA
Leu
>WENV183539719
OOAJ01000231
284742
Bacillota
GAA
Phe
>WENV183539778
OOAJ01000369
284742
Bacillota
GAA
Phe
>WENV183540082
OOAJ01002284
398832
Bacillota
TTC
Glu
>WENV183540267
OOAJ01007164
118669
Bacillota
GTA
Tyr
>WENV183540403
OOAJ01022442
201856
Bacillota
GAT
Ile
>WENV183539674
OOAJ01000158
285756
Bacillota
GCC
Gly
>WENV183539678
OOAJ01000158
285756
Bacillota
GCC
Gly
>WENV183539935
OOAJ01001101
285756
Bacillota
GCC
Gly
>WENV183539996
OOAJ01001455
398833
Bacillota
TGT
Thr
>WENV183540004
OOAJ01001506
398833
Bacillota
TGT
Thr
>WENV183540433
OOAJ01028589
285556
Bacillota
TGT
Thr
>WENV183539753
OOAJ01000297
175849
Bacillota
GTC
Asp
>WENV183539855
OOAJ01000611
175849
Bacillota
GTC
Asp
>WENV183539889
OOAJ01000829
175849
Bacillota
GTC
Asp
>WENV183540257
OOAJ01006843
175849
Bacillota
GTC
Asp
>WENV183540425
OOAJ01027097
175849
Bacillota
GTC
Asp
>WENV183540388
OOAJ01020181
280486
Bacillota
TGC
Ala
>WENV183539993
OOAJ01001447
56074
Bacillota
TGA
Ser
>WENV183540295
OOAJ01008621
56074
Bacillota
TGA
Ser
>WENV183539904
OOAJ01000959
280473
Bacillota
TGG
Pro
>WENV183539963
OOAJ01001239
280473
Bacillota
TGG
Pro
>WENV183540294
OOAJ01008615
280473
Bacillota
TGG
Pro
>WENV183540342
OOAJ01011813
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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