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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
106 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183542561
OOAM01007659
99852
Bacillota
GTA
Tyr
>WENV183542772
OOAM01039361
280500
Bacillota
TGC
Ala
>WENV183542173
OOAM01000973
405363
Bacillota
GCA
Cys
>WENV183542383
OOAM01003058
280428
Bacillota
GAA
Phe
>WENV183542732
OOAM01026701
291579
Bacillota
GAA
Phe
>WENV183542385
OOAM01003058
280466
Bacillota
TAC
Val
>WENV183541939
OOAM01000250
284746
Bacillota
CTG
Gln
>WENV183541844
OOAM01000126
280492
Bacillota
CTT
Lys
>WENV183542044
OOAM01000496
280492
Bacillota
CTT
Lys
>WENV183542412
OOAM01003363
175842
Bacillota
CAC
Val
>WENV183542422
OOAM01003531
175842
Bacillota
CAC
Val
>WENV183542153
OOAM01000883
291629
Bacillota
CCA
Trp
>WENV183542613
OOAM01010359
179563
Bacillota
GAT
Ile
>WENV183542608
OOAM01009936
295166
Bacillota
TGC
Ala
>WENV183542220
OOAM01001200
190476
Bacillota
CAT
Met
>WENV183541884
OOAM01000180
73664
Bacillota
CAG
Leu
>WENV183542128
OOAM01000783
280447
Bacillota
GAC
Val
>WENV183542297
OOAM01001728
280447
Bacillota
GAC
Val
>WENV183542168
OOAM01000951
5692
Bacillota
GCT
Ser
>WENV183542373
OOAM01002836
5692
Bacillota
GCT
Ser
>WENV183542489
OOAM01005056
5692
Bacillota
GCT
Ser
>WENV183542428
OOAM01003664
312274
Bacillota
GGC
Ala
>WENV183542067
OOAM01000564
186123
Bacillota
GTC
Asp
>WENV183542351
OOAM01002527
73009
Bacillota
CAG
Leu
>WENV183542374
OOAM01002871
73009
Bacillota
CAG
Leu
>WENV183542443
OOAM01003840
73009
Bacillota
CAG
Leu
>WENV183542607
OOAM01009878
280646
Bacillota
TGC
Ala
>WENV183542171
OOAM01000973
291581
Bacillota
CGG
Pro
>WENV183542227
OOAM01001241
291581
Bacillota
CGG
Pro
>WENV183542492
OOAM01005142
291581
Bacillota
CGG
Pro
>WENV183542256
OOAM01001400
175859
Bacillota
TCT
Arg
>WENV183542321
OOAM01001987
175859
Bacillota
TCT
Arg
>WENV183542434
OOAM01003814
179810
Bacillota
TCT
Arg
>WENV183541817
OOAM01000095
284627
Bacillota
GAA
Phe
>WENV183542164
OOAM01000948
284627
Bacillota
GAA
Phe
>WENV183542687
OOAM01017298
289147
Bacillota
GTT
Asn
>WENV183542068
OOAM01000564
291634
Bacillota
GAA
Phe
>WENV183541946
OOAM01000276
294020
Bacillota
TAC
Val
>WENV183542638
OOAM01012106
195824
Bacillota
GAT
Ile
>WENV183541898
OOAM01000204
293309
Bacillota
GTT
Asn
>WENV183542767
OOAM01037816
482449
Bacillota
TCC
Gly
>WENV183542520
OOAM01006069
484885
Bacillota
TCC
Gly
>WENV183541873
OOAM01000168
480322
Bacillota
CTG
Gln
>WENV183541998
OOAM01000394
480322
Bacillota
CTG
Gln
>WENV183542120
OOAM01000736
480322
Bacillota
CTG
Gln
>WENV183542170
OOAM01000973
480322
Bacillota
CTG
Gln
>WENV183542226
OOAM01001241
480322
Bacillota
CTG
Gln
>WENV183542491
OOAM01005142
480322
Bacillota
CTG
Gln
>WENV183542694
OOAM01019023
480322
Bacillota
CTG
Gln
>WENV183541773
OOAM01000027
187364
Bacillota
CAT
Met
>WENV183542378
OOAM01002974
175868
Bacillota
GTT
Asn
>WENV183542406
OOAM01003204
175868
Bacillota
GTT
Asn
>WENV183542496
OOAM01005261
175868
Bacillota
GTT
Asn
>WENV183542502
OOAM01005359
175868
Bacillota
GTT
Asn
>WENV183542260
OOAM01001416
284744
Bacillota
TTT
Lys
>WENV183542377
OOAM01002974
398854
Bacillota
CTC
Glu
>WENV183542405
OOAM01003204
398854
Bacillota
CTC
Glu
>WENV183542495
OOAM01005261
398854
Bacillota
CTC
Glu
>WENV183542501
OOAM01005359
398854
Bacillota
CTC
Glu
>WENV183542232
OOAM01001251
291576
Bacillota
CCC
Gly
>WENV183542172
OOAM01000973
480324
Bacillota
TTG
Gln
>WENV183542298
OOAM01001732
480324
Bacillota
TTG
Gln
>WENV183542319
OOAM01001953
480324
Bacillota
TTG
Gln
>WENV183542516
OOAM01005953
480324
Bacillota
TTG
Gln
>WENV183542789
OOAM01049393
400963
Bacillota
GTT
Asn
>WENV183542589
OOAM01009098
73638
Bacillota
AAG
Leu
>WENV183541975
OOAM01000347
56079
Bacillota
AAG
Leu
>WENV183542755
OOAM01032428
292374
Bacillota
TGC
Ala
>WENV183542199
OOAM01001074
179935
Bacillota
GTC
Asp
>WENV183542230
OOAM01001246
186051
Bacillota
GAT
Ile
>WENV183542704
OOAM01021341
186051
Bacillota
GAT
Ile
>WENV183541944
OOAM01000269
117745
Bacillota
GTA
Tyr
>WENV183542399
OOAM01003162
280444
Bacillota
GGT
Thr
>WENV183542448
OOAM01003973
280444
Bacillota
GGT
Thr
>WENV183542515
OOAM01005888
280444
Bacillota
GGT
Thr
>WENV183541812
OOAM01000076
483485
Bacillota
CCC
Gly
>WENV183542007
OOAM01000412
46643
Bacillota
TGA
Ser
>WENV183542410
OOAM01003278
179755
Bacillota
CCG
Arg
>WENV183542507
OOAM01005693
179755
Bacillota
CCG
Arg
>WENV183542587
OOAM01008882
179755
Bacillota
CCG
Arg
>WENV183542261
OOAM01001416
401111
Bacillota
TTC
Glu
>WENV183542586
OOAM01008806
58120
Bacillota
AAG
Leu
>WENV183542499
OOAM01005341
46835
Bacillota
TAA
Leu
>WENV183542200
OOAM01001074
284742
Bacillota
GAA
Phe
>WENV183542221
OOAM01001200
398832
Bacillota
TTC
Glu
>WENV183542051
OOAM01000505
280462
Bacillota
GAA
Phe
>WENV183541883
OOAM01000179
398852
Bacillota
CTC
Glu
>WENV183542084
OOAM01000626
398852
Bacillota
CTC
Glu
>WENV183542276
OOAM01001553
398852
Bacillota
CTC
Glu
>WENV183542437
OOAM01003814
309916
Bacillota
TTT
Lys
>WENV183542754
OOAM01032428
201856
Bacillota
GAT
Ile
>WENV183542192
OOAM01001036
289123
Bacillota
GGT
Thr
>WENV183542388
OOAM01003058
118370
Bacillota
TAG
Leu
>WENV183541766
OOAM01000021
312380
Bacillota
TAC
Val
>WENV183541910
OOAM01000218
280483
Bacillota
GAA
Phe
>WENV183542018
OOAM01000460
406186
Bacillota
CTC
Glu
>WENV183541911
OOAM01000218
285756
Bacillota
GCC
Gly
>WENV183542147
OOAM01000846
398833
Bacillota
TGT
Thr
>WENV183542194
OOAM01001045
398833
Bacillota
TGT
Thr
>WENV183542398
OOAM01003162
175849
Bacillota
GTC
Asp
>WENV183542052
OOAM01000505
280463
Bacillota
TTT
Lys
>WENV183541815
OOAM01000091
405393
Bacillota
GCC
Gly
>WENV183542167
OOAM01000951
56074
Bacillota
TGA
Ser
>WENV183542372
OOAM01002836
56074
Bacillota
TGA
Ser
>WENV183542488
OOAM01005056
56074
Bacillota
TGA
Ser
>WENV183542175
OOAM01000981
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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