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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183548413
OOAW01014349
280500
Bacillota
TGC
Ala
>WENV183547819
OOAW01000145
405363
Bacillota
GCA
Cys
>WENV183548417
OOAW01014811
184537
Bacillota
ACG
Arg
>WENV183548289
OOAW01003629
290391
Bacillota
TAC
Val
>WENV183547677
OOAW01000048
280428
Bacillota
GAA
Phe
>WENV183547815
OOAW01000145
280428
Bacillota
GAA
Phe
>WENV183548456
OOAW01021075
46687
Bacillota
TAA
Leu
>WENV183548438
OOAW01017679
296855
Bacillota
GGT
Thr
>WENV183548458
OOAW01022731
48505
Bacillota
TGA
Ser
>WENV183547675
OOAW01000048
280466
Bacillota
TAC
Val
>WENV183547797
OOAW01000122
175842
Bacillota
CAC
Val
>WENV183548091
OOAW01001023
227253
Bacillota
CGG
Pro
>WENV183547862
OOAW01000203
291629
Bacillota
CCA
Trp
>WENV183548129
OOAW01001428
287289
Bacillota
GCC
Gly
>WENV183548163
OOAW01001657
281320
Bacillota
GTG
His
>WENV183548200
OOAW01002113
228119
Bacillota
TCT
Arg
>WENV183548287
OOAW01003434
289717
Bacillota
CTT
Lys
>WENV183548440
OOAW01017822
179176
Bacillota
ACG
Arg
>WENV183548164
OOAW01001657
400590
Bacillota
TTG
Gln
>WENV183548312
OOAW01004588
20932
Bacillota
GCT
Ser
>WENV183548391
OOAW01011883
291553
Bacillota
GAA
Phe
>WENV183548232
OOAW01002513
215243
Bacillota
CAT
Met
>WENV183547696
OOAW01000060
190476
Bacillota
CAT
Met
>WENV183548460
OOAW01022888
339995
Bacillota
TGC
Ala
>WENV183548328
OOAW01005546
82124
Bacillota
TAA
Leu
>WENV183547641
OOAW01000030
280447
Bacillota
GAC
Val
>WENV183547795
OOAW01000122
280447
Bacillota
GAC
Val
>WENV183547575
OOAW01000012
312274
Bacillota
GGC
Ala
>WENV183547624
OOAW01000025
186123
Bacillota
GTC
Asp
>WENV183547809
OOAW01000140
186123
Bacillota
GTC
Asp
>WENV183547860
OOAW01000203
186123
Bacillota
GTC
Asp
>WENV183547890
OOAW01000251
73009
Bacillota
CAG
Leu
>WENV183547892
OOAW01000254
73009
Bacillota
CAG
Leu
>WENV183548325
OOAW01005359
481217
Bacillota
GCA
Cys
>WENV183548360
OOAW01007897
481217
Bacillota
GCA
Cys
>WENV183548404
OOAW01012908
180666
Bacillota
GGT
Thr
>WENV183548165
OOAW01001657
480524
Bacillota
GCA
Cys
>WENV183548348
OOAW01007572
283738
Bacillota
CGT
Thr
>WENV183547822
OOAW01000145
291581
Bacillota
CGG
Pro
>WENV183547739
OOAW01000079
175859
Bacillota
TCT
Arg
>WENV183548343
OOAW01006871
398835
Bacillota
GCC
Gly
>WENV183547889
OOAW01000247
481153
Bacillota
CCC
Gly
>WENV183547698
OOAW01000060
175831
Bacillota
ACG
Arg
>WENV183548439
OOAW01017679
184495
Bacillota
CAT
Met
>WENV183548374
OOAW01010041
141202
Bacillota
CAA
Leu
>WENV183547700
OOAW01000061
332181
Bacillota
TGT
Thr
>WENV183548435
OOAW01017679
332181
Bacillota
TGT
Thr
>WENV183548356
OOAW01007796
179130
Bacillota
ACG
Arg
>WENV183547625
OOAW01000025
291634
Bacillota
GAA
Phe
>WENV183547810
OOAW01000140
291634
Bacillota
GAA
Phe
>WENV183547648
OOAW01000032
480322
Bacillota
CTG
Gln
>WENV183547821
OOAW01000145
480322
Bacillota
CTG
Gln
>WENV183548277
OOAW01003285
401685
Bacillota
TTG
Gln
>WENV183547670
OOAW01000048
175868
Bacillota
GTT
Asn
>WENV183547914
OOAW01000275
175868
Bacillota
GTT
Asn
>WENV183547912
OOAW01000275
322848
Bacillota
CTT
Lys
>WENV183547927
OOAW01000295
322848
Bacillota
CTT
Lys
>WENV183547913
OOAW01000275
398854
Bacillota
CTC
Glu
>WENV183547926
OOAW01000295
398854
Bacillota
CTC
Glu
>WENV183547823
OOAW01000145
480324
Bacillota
TTG
Gln
>WENV183548313
OOAW01004616
497729
Bacillota
CCA
Trp
>WENV183548249
OOAW01002709
175911
Bacillota
GTC
Asp
>WENV183548300
OOAW01003976
292374
Bacillota
TGC
Ala
>WENV183547745
OOAW01000086
280444
Bacillota
GGT
Thr
>WENV183547747
OOAW01000086
280444
Bacillota
GGT
Thr
>WENV183548319
OOAW01004958
119459
Bacillota
TAG
Leu
>WENV183548049
OOAW01000720
179755
Bacillota
CCG
Arg
>WENV183548390
OOAW01011883
280547
Bacillota
GTC
Asp
>WENV183548448
OOAW01019881
46835
Bacillota
TAA
Leu
>WENV183547697
OOAW01000060
398832
Bacillota
TTC
Glu
>WENV183548385
OOAW01011508
175915
Bacillota
GTC
Asp
>WENV183548046
OOAW01000694
280476
Bacillota
TTT
Lys
>WENV183548378
OOAW01010837
280476
Bacillota
TTT
Lys
>WENV183548003
OOAW01000523
281330
Bacillota
CTG
Gln
>WENV183548387
OOAW01011508
118359
Bacillota
GTA
Tyr
>WENV183548299
OOAW01003976
201856
Bacillota
GAT
Ile
>WENV183547703
OOAW01000061
289123
Bacillota
GGT
Thr
>WENV183548134
OOAW01001479
321248
Bacillota
TAC
Val
>WENV183548386
OOAW01011508
321248
Bacillota
TAC
Val
>WENV183548432
OOAW01017572
298260
Bacillota
GTT
Asn
>WENV183548270
OOAW01003169
406186
Bacillota
CTC
Glu
>WENV183548355
OOAW01007796
47847
Bacillota
TAA
Leu
>WENV183547738
OOAW01000078
398833
Bacillota
TGT
Thr
>WENV183548290
OOAW01003629
285556
Bacillota
TGT
Thr
>WENV183547676
OOAW01000048
175849
Bacillota
GTC
Asp
>WENV183547746
OOAW01000086
175849
Bacillota
GTC
Asp
>WENV183547817
OOAW01000145
175849
Bacillota
GTC
Asp
>WENV183548108
OOAW01001175
73132
Bacillota
CAG
Leu
>WENV183548043
OOAW01000694
179166
Bacillota
TCT
Arg
>WENV183548403
OOAW01012874
280486
Bacillota
TGC
Ala
>WENV183547576
OOAW01000012
405393
Bacillota
GCC
Gly
>WENV183547811
OOAW01000140
405393
Bacillota
GCC
Gly
>WENV183547861
OOAW01000203
405393
Bacillota
GCC
Gly
>WENV183548351
OOAW01007796
284680
Bacillota
TTT
Lys
>WENV183547642
OOAW01000030
56074
Bacillota
TGA
Ser
>WENV183547796
OOAW01000122
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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