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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183548515
OOAY01000034
179917
Bacillota
CAT
Met
>WENV183548517
OOAY01000034
309916
Bacillota
TTT
Lys
>WENV183548573
OOAY01000115
184497
Bacillota
GGG
Pro
>WENV183548587
OOAY01000138
330413
Bacillota
CTT
Lys
>WENV183548604
OOAY01000176
398857
Bacillota
TTC
Glu
>WENV183548634
OOAY01000249
175857
Bacillota
GTG
His
>WENV183548635
OOAY01000249
401685
Bacillota
TTG
Gln
>WENV183548640
OOAY01000258
52748
Bacillota
TGA
Ser
>WENV183548644
OOAY01000267
46835
Bacillota
TAA
Leu
>WENV183548757
OOAY01001283
483485
Bacillota
CCC
Gly
>WENV183548783
OOAY01001528
231532
Bacillota
ACG
Arg
>WENV183548800
OOAY01001701
497729
Bacillota
CCA
Trp
>WENV183548809
OOAY01001837
360353
Bacillota
CTT
Lys
>WENV183548850
OOAY01002376
342104
Bacillota
TAC
Val
>WENV183548852
OOAY01002376
285756
Bacillota
GCC
Gly
>WENV183548872
OOAY01002936
118669
Bacillota
GTA
Tyr
>WENV183548873
OOAY01002936
82124
Bacillota
TAA
Leu
>WENV183548874
OOAY01003031
343590
Bacillota
GCC
Gly
>WENV183548878
OOAY01003334
452735
Bacillota
GCC
Gly
>WENV183548879
OOAY01003334
489283
Bacillota
GCA
Cys
>WENV183548886
OOAY01003660
178956
Bacillota
GAT
Ile
>WENV183548900
OOAY01004449
400600
Bacillota
TTG
Gln
>WENV183548903
OOAY01004449
179251
Bacillota
CAT
Met
>WENV183548909
OOAY01005038
187364
Bacillota
CAT
Met
>WENV183548966
OOAY01017107
156219
Bacillota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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